Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 455 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Sphingobium sp. HT1-2

 Score =  136 bits (342), Expect = 1e-36
 Identities = 92/241 (38%), Positives = 135/241 (56%), Gaps = 20/241 (8%)

Query: 17  EKLQKVLARIGVGSRRDVEAWISQGRIKVNGVE----ATLGQRVDLHDAIAVDGKLIKRE 72
           +++ K+LAR G+ SRR++E  I +GRI  +GV     ATL     LH  + VDG  +   
Sbjct: 216 QRIAKLLARAGIASRREIERMIEEGRIARDGVTIDTPATL--LTSLH-GVTVDGDPV--- 269

Query: 73  EAAEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFT 132
            AA A  R+ +++KP G + T  DP GRPT++D LP     R + IGRLD+NT GLLL T
Sbjct: 270 -AAPAPARLFLFHKPTGFLTTERDPAGRPTIYDILPDDLP-RLMPIGRLDMNTEGLLLLT 327

Query: 133 TDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLED---GPAKFTDIQKAPG 189
           TDGE    +  P+  + R Y  R  GEV  + +E L  G+ ++    GP +  ++++  G
Sbjct: 328 TDGEFKREMELPATGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIE-ANLERRTG 386

Query: 190 GEGFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREMTQGE 249
               N W    + EG+NREVRR+ E   + V+RL R  +GP F   +L  G   E+ Q +
Sbjct: 387 R---NQWIEMTLTEGKNREVRRVLEHFELKVNRLIRTSYGP-FELGELAGGAVEEVRQHD 442

Query: 250 I 250
           +
Sbjct: 443 L 443



 Score = 34.3 bits (77), Expect = 7e-06
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 284 RPLGRGERVRNLRPAHEGAA---TGERPARQPREEAPRKPTRGSTVAERPSEMRKRPGKP 340
           R  G G   R   P   G A   TG  PAR       R  +R    +ERPS   +RP + 
Sbjct: 11  RRSGPGGPKRPSGPGSRGGADRGTGRGPARSDSRNEGRFDSRSEGRSERPSPRGERPDR- 69

Query: 341 DGDKPAGRGRGKPRG 355
            G +P   G G+ RG
Sbjct: 70  -GPRPDRNGPGEGRG 83