Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 243 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  112 bits (279), Expect = 1e-29
 Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 12/233 (5%)

Query: 18  KLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLHDAIAVDGKLIKREEAAEA 77
           ++ K L+ IG  SRR  +  + +G I +NG    LG +V   D + V+GKL+   +    
Sbjct: 7   RINKYLSEIGYCSRRAADKLLEEGCITINGKVPELGTKVSPGDDVRVNGKLVSPPKEDFI 66

Query: 78  TRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFTTDGEL 137
               I ++KP G +CT D    +  + D +  PK  R   IGRLD  + GL+  T DG++
Sbjct: 67  ---YIAFHKPVGIVCTTDTKREKDNIIDYINHPK--RIFPIGRLDKPSEGLIFLTNDGDI 121

Query: 138 ANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKFTDIQKAPGGEGFNHWY 197
            N+++      ++EY V V   +    I ++  GV + D     T  +K    +     +
Sbjct: 122 VNKILRARNNHEKEYVVTVDKPITPNFIHKMANGVPILD-----TVTRKCKVEQIGKRKF 176

Query: 198 HCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREMTQGEI 250
             V+ +G NR++RR+ +     V++LKR+R   V L  D+P+G+WR +T  E+
Sbjct: 177 KIVLTQGLNRQIRRMCQYLDYEVTKLKRIRIMNVQL--DMPVGKWRYLTPAEL 227