Pairwise Alignments

Query, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

Subject, 291 a.a., 23S rRNA pseudouridine(2605) synthase from Escherichia coli BL21

 Score =  281 bits (720), Expect = 1e-80
 Identities = 155/287 (54%), Positives = 189/287 (65%), Gaps = 10/287 (3%)

Query: 17  EKLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLHDA--IAVDGKLIKREEA 74
           EKLQKVLAR G GSRR++E+ I  GR+ V+G  A LG RV++     I +DG LI   E+
Sbjct: 3   EKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRES 62

Query: 75  AEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFTTD 134
           AE   RV+ Y KP+GE+CTR+DPEGRPTVFDRLP+ +  RWI +GRLD+NT GLLLFTTD
Sbjct: 63  AEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTD 122

Query: 135 GELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKFTDIQKAPGGEGFN 194
           GELANRLMHPS E++REYAVRV G+VDD  +  L  GV LEDGPA F  I K  GGEG N
Sbjct: 123 GELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTI-KFSGGEGIN 181

Query: 195 HWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMGRWREMTQGEIDILA 254
            WY+  + EGRNREVRRLWE+ G+ VSRL RVR+G + L   LP G W E+   + + L 
Sbjct: 182 QWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLR 241

Query: 255 AEVGLQP-------VALPAMKLKAKDKMERLQRKSTRPLGRGERVRN 294
             V L P       V     ++KA      ++R S    GR    RN
Sbjct: 242 ELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRN 288