Pairwise Alignments

Query, 472 a.a., aromatic amino acid transport protein from Pseudomonas putida KT2440

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score =  404 bits (1039), Expect = e-117
 Identities = 204/456 (44%), Positives = 291/456 (63%), Gaps = 12/456 (2%)

Query: 3   GQNMHSGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVMKSAGPSMILGYAICGFIAFMI 62
           G+    G LKR L  RHI+L+ALG  IG GLFLGSA  ++ AGP+++L Y I G    +I
Sbjct: 10  GETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVI 69

Query: 63  MRQLGEMIVEEPVAGSFSHFAHTYWGGFAGFLSGWNCWVLYILVGMSELSAVGKYVHYWW 122
           MR LGEM V  PVAGSFS +A  Y G  AGFL+GWN W L+++  ++E++AV  Y+  W+
Sbjct: 70  MRALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWF 129

Query: 123 PEIPTWVTAAAFFVLINAINLMNVKFFGEAEFWFAIIKVVAIVSMI--GLGAYLLTSGSG 180
           P+ P W+ A A  + + +INL+ VK FGE EFWFA+IK+V I++M+  G+G      G+ 
Sbjct: 130 PDTPRWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGND 189

Query: 181 GPEATVANLWTHGGFFPNGVSGLVMALAFIMFSFGGLEMLGFTAAEADKPKTVIPKAINQ 240
           G    ++NLW HGGF PNGV G++M+L  +MF++ G+EM+G TA EA  P+  IP AI  
Sbjct: 190 GVALGISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGS 249

Query: 241 VIYRILIFYVGALVVLLSLTPWDNLVASIDASGGSYGSSPFVQVFSLLGSDVAANLLNFV 300
           V +RIL+FYVGAL V+LS+ PW+ +        G+ G SPFV  F  LG   AA ++NFV
Sbjct: 250 VFWRILLFYVGALFVILSIYPWNEI--------GTQG-SPFVMTFERLGIKTAAGIINFV 300

Query: 301 VLTAALSVYNSGTYCNARMLLGMAEQGDAPASLAKVDKRGVPVRSILVSAAVTFVAVLLN 360
           V+TAALS  N G +   RML  +A+ G APA+ AK    GVP +++L+S     + VLLN
Sbjct: 301 VITAALSSCNGGIFSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLN 360

Query: 361 YLMPQNALELLMSLVVATLVINWAMISYSHLKFRQHLDRTGQKPLFKALW-YPYGNYVVL 419
           YL+P+     + S+     +  W MI  + LKFR+ L    Q  L   +W YP  +Y+ L
Sbjct: 361 YLVPEKVFVWVTSIATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLAL 420

Query: 420 AFVVLILGIMLMIPGIQVSVYAIPVWLLAMLVVYMV 455
           AF++L++G+M   P  ++++Y  PV+L+ + V++ V
Sbjct: 421 AFLLLVVGLMAYFPDTRIALYVGPVFLVLLTVLFYV 456