Pairwise Alignments

Query, 294 a.a., putative LysR-type transcriptional activator protein from Pseudomonas putida KT2440

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  199 bits (506), Expect = 6e-56
 Identities = 119/292 (40%), Positives = 164/292 (56%), Gaps = 4/292 (1%)

Query: 4   RHLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQ 63
           R   PS + L+ FEAAAR+ES+T+AA EL+LTQ AV RQ+  LE  L + LFRR  R V+
Sbjct: 2   RRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVR 61

Query: 64  LTDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAH 123
           LT+ G  Y R+++  L  +   TL  +  Q G   + LA +PTFG++WLLPRL  F   H
Sbjct: 62  LTEAGLSYSRQVAAQLDAVERDTLSVMR-QQGANVIELAVVPTFGTQWLLPRLKDFQQRH 120

Query: 124 PGMLVHIHSRIETINFDTSEIDAAIGVASHDLPGLVCHRLHAEELVVILPPEAGVGSQGW 183
           P + V++ +R     F  +  DAAI     D  G   H+L  E  V +  P A +  QG 
Sbjct: 121 PEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSP-ALLNGQGM 179

Query: 184 SPAR-ISEEVLLNVANNPHAWGEWFSHHGLPHRAMRLGPSFELTSHLIQAVRAGIGIGLV 242
             AR I++  LL  +  P+AW +WF   G+       GP +EL S L QA    +GI L+
Sbjct: 180 LEARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALI 239

Query: 243 PRILVEEELAKGEL-YSPGVAFASQRSYYLIYPPRNEALPSLRAFRGWLLEQ 293
           P  L++ EL +G L  +   A +S ++YYL+ P R     SLRAFR WL+ Q
Sbjct: 240 PPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQ 291