Pairwise Alignments

Query, 519 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

 Score =  203 bits (516), Expect = 1e-56
 Identities = 108/241 (44%), Positives = 157/241 (65%), Gaps = 1/241 (0%)

Query: 207 IFQSSRVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHLASPRGQSPLMALNCAG 266
           I  S + M  +  + R++AP D+ +LI+GE+GTGKEL+ARA H  S R ++P++++NCA 
Sbjct: 152 IIGSCQPMQDMYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAA 211

Query: 267 LPESMAETELFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVGEMSPRLQVKLLRFLQD 326
           +PE++ E+ELFG+  GAF GA A G+ GL+E   GGTLFLD +GE+    Q +LLR LQ+
Sbjct: 212 IPETLIESELFGHEKGAFTGASA-GRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQE 270

Query: 327 GCFRRVGSDEEVYLDVRVICATQVDLSELCARGEFRQDLYHRLNVLSLHIPPLRECMDGL 386
           G  RRVGS +   +DVR+I AT  DL  L   G+FR+DLY+RL+V++L +P LRE    +
Sbjct: 271 GEIRRVGSVQSQKVDVRLIAATHRDLKNLAKAGQFREDLYYRLHVIALKLPALRERGSDV 330

Query: 387 EGLVQHFLDQASRQIGCAMPRLAPAAMDKLGQYHWPGNVRQLENVLFQAVSLCDGGVVKS 446
             +   FL + S +IG      +  A   +  Y WPGNVR+LEN + +AV L +   + +
Sbjct: 331 NEIANVFLARQSARIGRDDLHFSAEAEQAIRHYSWPGNVRELENAVERAVILSESAEISA 390

Query: 447 E 447
           E
Sbjct: 391 E 391