Pairwise Alignments

Query, 519 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 521 a.a., transcriptional regulator TyrR from Dickeya dianthicola ME23

 Score =  407 bits (1047), Expect = e-118
 Identities = 225/516 (43%), Positives = 325/516 (62%), Gaps = 5/516 (0%)

Query: 1   MRIKVHCQNRIGILRDILNLLVEYGINVLRGEVGGDHGNAIYLHCPNLINLQFQALRPKF 60
           MR++V C++RIG+ R++L+LLV   I++   E+  D    IYL+   L    F+ L  + 
Sbjct: 1   MRLEVFCEDRIGLTRELLDLLVLRHIDLRGIEI--DPTGRIYLNFTTLGFDAFRELMTEI 58

Query: 61  EAIAGVFGVKRVGLMPSERRHMELNALLGALDFPVLSIDMGGSIVAANRAAAQLLGVRVD 120
             I GV  V+ V  MPSER H  LNALL ++  PVLS D+ G +   N AA  L  +  +
Sbjct: 59  RRIPGVSDVRTVAFMPSEREHRALNALLESMPEPVLSFDLKGKVELVNAAALNLFALTQE 118

Query: 121 EVPGMPLARYVEDFDLPELVRANKSRINGLRIKVKGDVFLADIAPLQSEHDDSEA-LAGA 179
           +   + + + + D+      +    +    R+ ++G  FL ++ P+  + D  ++ +AGA
Sbjct: 119 KARALNVGQLLNDYPFSRW-QEQGGQPEMARVVIRGQDFLQEVTPVHLDDDKGKSTVAGA 177

Query: 180 VLTLHRADRIGERIYNVRKQELRGFDSIFQSSRVMAAVVREARRMAPLDAPLLIEGETGT 239
           ++TL  A R+G ++ +    + R FD I   S  M  VV +AR++A LDAPLL+ GETGT
Sbjct: 178 LVTLKSAARMGRQLQDTPVNDEREFDHIVAVSPRMRQVVEQARKLAMLDAPLLLAGETGT 237

Query: 240 GKELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELT 299
           GK++LARACHL S RG+ P +ALNCA LP+ + E+EL+G+ PGA+  A  EGK G  E  
Sbjct: 238 GKDMLARACHLRSSRGKKPFLALNCAALPDDVMESELYGHAPGAYPNA-LEGKKGFFEQA 296

Query: 300 AGGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARG 359
            GG++ LD VG+MSP++Q KLLRFL DG FRRVG + E+++DVRV CATQ ++ EL  RG
Sbjct: 297 NGGSVLLDEVGDMSPQMQTKLLRFLNDGTFRRVGEEHEIHVDVRVFCATQKNMLELVQRG 356

Query: 360 EFRQDLYHRLNVLSLHIPPLRECMDGLEGLVQHFLDQASRQIGCAMPRLAPAAMDKLGQY 419
            FR+DLY+RLNVL+L +PPLREC   +  LV+ F+ + + + G A P +A    + L QY
Sbjct: 357 LFREDLYYRLNVLALQLPPLRECPADVMPLVELFVARFADEQGIARPYIAQEVRNLLPQY 416

Query: 420 HWPGNVRQLENVLFQAVSLCDGGVVKSEHIRLPDYGVRQPLGEFSLEGDLSQIVGRFEKA 479
            WPGNVRQL+N +++A++  +G  ++   I LP +       +  LEG L  I  RFE++
Sbjct: 417 GWPGNVRQLKNTIYRALAQMEGDELRLRDIDLPAFQPEIVHNDDLLEGSLDDISKRFERS 476

Query: 480 VLESLMGEFPSSRALGKRLGVSHTTIANKLRDYSLN 515
           VL  L   +PS+R L KRLGVSHT IANKLR+Y L+
Sbjct: 477 VLTRLYQTYPSTRKLAKRLGVSHTAIANKLREYGLS 512