Pairwise Alignments

Query, 519 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 513 a.a., aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase from Escherichia coli BL21

 Score =  421 bits (1083), Expect = e-122
 Identities = 231/518 (44%), Positives = 325/518 (62%), Gaps = 12/518 (2%)

Query: 1   MRIKVHCQNRIGILRDILNLLVEYGINVLRGEVGGDHGNAIYLHCPNLINLQFQALRPKF 60
           MR++V C++R+G+ R++L+LLV  GI++   E+  D    IYL+   L    F +L  + 
Sbjct: 1   MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEI--DPIGRIYLNFAELEFESFSSLMAEI 58

Query: 61  EAIAGVFGVKRVGLMPSERRHMELNALLGALDFPVLSIDMGGSIVAANRAAAQLLGVRVD 120
             IAGV  V+ V  MPSER H+ L+ALL AL  PVLS+DM   +  AN A+ QL G ++D
Sbjct: 59  RRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKVDMANPASCQLFGQKLD 118

Query: 121 EVPGMPLARYVEDFDLPELVRANKSRINGLRIKVKGDVFLADIAPLQ-SEHDDSEALAGA 179
            +     A+ +  F+    + +     +   + + G  FL +I P+   + +D   L GA
Sbjct: 119 RLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLMEITPVYLQDENDQHVLTGA 178

Query: 180 VLTLHRADRIGERIYNVRKQELRGFDSIFQSSRVMAAVVREARRMAPLDAPLLIEGETGT 239
           V+ L    R+G ++ NV  Q++  F  I   S  M  VV +A+++A L APLLI G+TGT
Sbjct: 179 VVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGT 238

Query: 240 GKELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELT 299
           GK+L A ACH ASPR   P +ALNCA +PE   E+ELFG+ P        EGK G  E  
Sbjct: 239 GKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAP--------EGKKGFFEQA 290

Query: 300 AGGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARG 359
            GG++ LD +GEMSPR+Q KLLRFL DG FRRVG D EV++DVRVICATQ +L EL  +G
Sbjct: 291 NGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKG 350

Query: 360 EFRQDLYHRLNVLSLHIPPLRECMDGLEGLVQHFLDQASRQIGCAMPRLAPAAMDKLGQY 419
            FR+DLY+RLNVL+L++PPLR+C   +  L + F+ + + + G   P+LA      L +Y
Sbjct: 351 MFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRY 410

Query: 420 HWPGNVRQLENVLFQAVSLCDGGVVKSEHIRLPDY-GVRQPLGEFSLEGDLSQIVGRFEK 478
            WPGNVRQL+N +++A++  DG  ++ + I LPDY      +GE ++EG L +I  RFE+
Sbjct: 411 AWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATVAVGEDAMEGSLDEITSRFER 470

Query: 479 AVLESLMGEFPSSRALGKRLGVSHTTIANKLRDYSLNK 516
           +VL  L   +PS+R L KRLGVSHT IANKLR+Y L++
Sbjct: 471 SVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ 508