Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score =  181 bits (458), Expect = 2e-50
 Identities = 110/261 (42%), Positives = 151/261 (57%), Gaps = 13/261 (4%)

Query: 1   MKKL-ALLGALALSVFSLVSQAAE-KPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALC 58
           MKKL + +    L +   V+ AA  + L+I  E AYPPF +   +  + GFD DI NALC
Sbjct: 1   MKKLTSTITTATLWLLCTVAGAAHAETLRIASEGAYPPFNYVDSNNRLHGFDIDIANALC 60

Query: 59  EEMKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKD 118
           E MK  CT+V Q+++G+IPAL  +K DAI++SM++T++RKK + FT RYY TP  + +  
Sbjct: 61  ERMKVNCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAH 120

Query: 119 GTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGT 178
            + +SD+    KG  +G Q  S    +A+E     GATV  Y +Q+E   D+AAGRLDG 
Sbjct: 121 DSGISDAQTNFKGLTVGAQSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDGV 180

Query: 179 VADATLLEDGFLKTDAGKG---FAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAID 235
           +AD   L    L   AG G     F+G    D         IAVR+GD    +R+N A+D
Sbjct: 181 IADKYPL----LAWVAGAGKDCCTFLG----DIDGTNTDAAIAVRQGDVELRERLNKALD 232

Query: 236 AIRANGKYKEIESKYFNFDIY 256
            I A+G YK I  +YF FDIY
Sbjct: 233 EIVADGTYKNISRRYFAFDIY 253