Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  189 bits (480), Expect = 5e-53
 Identities = 100/253 (39%), Positives = 151/253 (59%), Gaps = 3/253 (1%)

Query: 5   ALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEMKTK 64
           +L  AL L + +       K ++ G+   YPPF     DGS+ GFD ++GNA+C +++ K
Sbjct: 6   SLFAALLLPLCATAHAQEWKEIRFGVFPEYPPFESVAADGSLQGFDIELGNAICAKLEVK 65

Query: 65  CTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGTTVSD 124
           CTWV  EFDG+IPAL+ RK DAI+SSM++T  R+K +DF+ R +L+P  ++ +      D
Sbjct: 66  CTWVHNEFDGMIPALRARKFDAIMSSMAVTPAREKIIDFSDRLFLSPTSVITRKSADFGD 125

Query: 125 SLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVADATL 184
           + + L GK++GV +GS+ + +A+  L   GA +  Y +Q++ Y D+  GRLD T+ D   
Sbjct: 126 TPESLMGKQVGVLQGSLQEAYARAHLAKLGAQIKAYQSQDQNYADLQNGRLDATLTDKLE 185

Query: 185 LEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRANGKYK 244
            +  FL    G  F   GPAF D     D I + +RK D+A    IN  I A++A+G Y 
Sbjct: 186 AQLNFLSKPEGSDFK-TGPAFKDPTLPLD-IAMGLRKNDQALRALINKGIAAVQADGTYA 243

Query: 245 EIESKYF-NFDIY 256
           +I+ KYF + DIY
Sbjct: 244 QIQKKYFGDQDIY 256