Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  298 bits (763), Expect = 8e-86
 Identities = 155/258 (60%), Positives = 184/258 (71%), Gaps = 2/258 (0%)

Query: 1   MKKLALLGALALSVF-SLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCE 59
           MKK +L+  LAL +  S  + AAEK L+IGIEAAYPPFA K  +G I GFDYDIGNALC 
Sbjct: 1   MKKRSLITVLALGLLASSHAMAAEKTLRIGIEAAYPPFASKTEEGKIVGFDYDIGNALCA 60

Query: 60  EMKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDG 119
           +MK KC WVE EFDGLIP+LKV+KID  LSSM+I +DRKKSVDFT +YY T +RLVMK+G
Sbjct: 61  QMKVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEG 120

Query: 120 TTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTV 179
             V D    LKGK IGVQR +  DR+A EV   KG  V  Y    EIY+D+AAGRLD   
Sbjct: 121 AVVDDQYASLKGKTIGVQRATTTDRYATEVFEPKGINVKRYSNNEEIYMDLAAGRLDAIF 180

Query: 180 ADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRA 239
           AD   L D FL+   GKG+AFVGP   D KY G+G GIAVRKG+   V ++NAAID IRA
Sbjct: 181 ADTIPLND-FLQMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVGQLNAAIDGIRA 239

Query: 240 NGKYKEIESKYFNFDIYG 257
           +G+Y++I  +YF  DIYG
Sbjct: 240 SGEYQKISQQYFKSDIYG 257