Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  189 bits (480), Expect = 5e-53
 Identities = 100/251 (39%), Positives = 147/251 (58%), Gaps = 4/251 (1%)

Query: 2   KKLALLGALALSVFSLVSQAAE-KPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEE 60
           K L  L ALAL + +  + A E K L+ G++ +Y PF  K  DGS+ GFD D+GNA+C E
Sbjct: 3   KALLTLSALALCMAAGSTLAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAE 62

Query: 61  MKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGT 120
           +K KC WVE +FDG+IP LK  K D ++SSM++T  R+K++DF+   +  P  LV K G 
Sbjct: 63  LKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKKGA 122

Query: 121 TVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVA 180
             S + + LKGK +G ++G+I + +AK VL   G T   Y  Q+++Y D+ +GRLD +V 
Sbjct: 123 GYS-TPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASVQ 181

Query: 181 DATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRAN 240
           D    E GFLK+ AG G+     A  D         I ++KG+      ++  I A+  +
Sbjct: 182 DMLQAELGFLKSPAGAGYEV--SAAIDDPLLPSKTAIGIKKGNTELKTLLDKGIKALHDD 239

Query: 241 GKYKEIESKYF 251
           G Y  I+ K+F
Sbjct: 240 GTYATIQKKHF 250