Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  191 bits (486), Expect = 1e-53
 Identities = 109/253 (43%), Positives = 151/253 (59%), Gaps = 8/253 (3%)

Query: 3   KLALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEMK 62
           K  LL A A  V S  + AAEK L++GIEAAYPPF  K   G++ GFD DIG+ALC +MK
Sbjct: 5   KKFLLAAAATLVMSANAMAAEK-LRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMK 63

Query: 63  TKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGTTV 122
            +C+ V  ++DG+IPAL  +K D ++SS+SITD+RK++VDFT  YY    + +       
Sbjct: 64  VECSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDF 123

Query: 123 SDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVADA 182
               + LKGK IG QR ++   + ++        +  Y TQ   YLD+ +GR+DG +AD 
Sbjct: 124 KTDKESLKGKVIGTQRATLAGTYLED--NYPDVEIKLYDTQENAYLDLVSGRIDGILAD- 180

Query: 183 TLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRANGK 242
             ++  +LK+  G  F F G    D+    D IGIAVRKGD    D +N A+  I+A+G 
Sbjct: 181 KYVQYEWLKSKDGSNFEFKGEPVMDS----DKIGIAVRKGDTKLRDDLNKALAEIKADGT 236

Query: 243 YKEIESKYFNFDI 255
           YK+I  KYF F I
Sbjct: 237 YKKINDKYFPFSI 249