Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 259 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  214 bits (544), Expect = 2e-60
 Identities = 111/259 (42%), Positives = 157/259 (60%), Gaps = 3/259 (1%)

Query: 1   MKKLALLGALALSVFSLVSQAAEKP--LKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALC 58
           MKK+     LAL VF+  S  AE P  +KIG +  Y PF  K   G + GFD D+   LC
Sbjct: 1   MKKMLKFLPLAL-VFAAGSALAEVPKNIKIGTDPTYAPFESKDASGQLVGFDIDLAKELC 59

Query: 59  EEMKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKD 118
           + ++  CT+VE +FD LIP+LK +KIDAI+SS+SIT+ R++ + FT + Y   ARL+ K 
Sbjct: 60  KRIQANCTFVESDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFTDKLYAANARLIAKK 119

Query: 119 GTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGT 178
           G+ +  +LD LKGK++GV + S  + +A +    KG  VV Y  Q+ IY D+ AGR+D  
Sbjct: 120 GSPILPTLDALKGKRVGVLQASTQESYANQYWQPKGVDVVAYQNQDLIYADLTAGRIDAA 179

Query: 179 VADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIR 238
             D     +GFLK  AGK +AF GPA  D K FG G G+ +RK +      ++ A   +R
Sbjct: 180 FQDEVAGSEGFLKQAAGKEYAFAGPAVKDDKLFGVGTGMGLRKNETELKAALDKAFATLR 239

Query: 239 ANGKYKEIESKYFNFDIYG 257
            +G Y ++  KYF+FD+YG
Sbjct: 240 KDGTYDKLAKKYFDFDVYG 258