Pairwise Alignments

Query, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 258 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  213 bits (542), Expect = 3e-60
 Identities = 115/256 (44%), Positives = 157/256 (61%), Gaps = 2/256 (0%)

Query: 1   MKKLALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEE 60
           MKKL++L  L+L + S     A+  L+ G+EA YPPF  K   G + GFD D+GNA+C+ 
Sbjct: 1   MKKLSML-MLSLGLLSSSVALAQTELRFGLEAEYPPFESKNAKGRLEGFDIDLGNAICKA 59

Query: 61  MKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGT 120
              +CTWVE  FD LIPAL+ +K DAI S+M+IT+ R++++DFT   Y  P +LV K  T
Sbjct: 60  GNFQCTWVETSFDALIPALQAKKFDAINSAMNITEKRREAIDFTPPIYRIPTQLVGKPDT 119

Query: 121 TVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVA 180
            ++ + D LKGK IGV +GSI + +AK     KG TV  Y  QN  Y D+AAGRLDGT+ 
Sbjct: 120 GLAPTPDALKGKNIGVLQGSIQEVYAKAHWEPKGVTVTSYKDQNLAYDDLAAGRLDGTLV 179

Query: 181 DATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRAN 240
            A   + GFL    GKGFAF+G    D    G GIG  +RK D A    ++ AI  ++ +
Sbjct: 180 MAAAGQSGFLDKPEGKGFAFIGGPVEDTAILGSGIGFGLRKSDAALKAELDKAIKQVKDD 239

Query: 241 GKYKEIESKYF-NFDI 255
           G  +++  KYF  FD+
Sbjct: 240 GTVEKLAKKYFPGFDV 255