Pairwise Alignments

Query, 229 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 222 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  119 bits (297), Expect = 6e-32
 Identities = 64/211 (30%), Positives = 117/211 (55%), Gaps = 12/211 (5%)

Query: 8   VILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVLILL 67
           ++L GAW+T+Q+ + S  L+  LGL+   ++LSP+R L+W       VIRG+P +V +  
Sbjct: 16  ILLQGAWVTIQITVLSFLLSSALGLVLALIKLSPIRALSWTASTIINVIRGLPIIVQLFY 75

Query: 68  IFYGGQDIINRVAPLLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEA 127
           I++        V P +G    + L    AG+  +G  + AY +E FR   + + +GQ EA
Sbjct: 76  IYF--------VLPDMG----VHLTAFYAGVIGMGIAYSAYQAENFRTGIIAVEQGQREA 123

Query: 128 GVAYGMSPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADA 187
             A GM    +  R+ +PQ  R+A+P + N  +++ K ++L+S + + +M  + +  A +
Sbjct: 124 AEALGMRSALMMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRQGQLIASS 183

Query: 188 TREPFTFFLAVAALYLVLTSVSLLALKYLER 218
           T +  T +  VA LYL+++   +  L+ +E+
Sbjct: 184 TFQNMTVYTLVALLYLLMSLPLVYGLRRMEQ 214