Pairwise Alignments

Query, 229 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  110 bits (274), Expect = 3e-29
 Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 13/216 (6%)

Query: 9   ILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVR-WLAWLGDLYSTVIRGIPDLVLILL 67
           +L GA +T+++   ++AL  VLGL+    RL+P R W+      Y   IRG P LV + +
Sbjct: 15  LLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAIRGTPLLVQLFI 74

Query: 68  IFYGGQDIINRVAPLLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEA 127
           +F+G         P  G    I L   + G+  LG   GAY+SE  RGA   I KGQ  A
Sbjct: 75  LFFG--------LPHFG----ILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMA 122

Query: 128 GVAYGMSPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADA 187
             + GM+P     +I +PQ +   IP   N ++ L K +AL+S++ + D+M + ++    
Sbjct: 123 AQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182

Query: 188 TREPFTFFLAVAALYLVLTSVSLLALKYLERRYSVG 223
           +      +LA+A +Y VLT    L L++ E++   G
Sbjct: 183 SYRSLEVYLAIAVVYFVLTGTMTLILRHFEQKLRQG 218