Pairwise Alignments

Query, 229 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 236 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

 Score =  156 bits (394), Expect = 4e-43
 Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 1/223 (0%)

Query: 4   GYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLV 63
           G+G  +  GA +T+ +A  S    I+ G +  A +LS    L  LGD+Y+TV+RG+P+L+
Sbjct: 12  GWGDELARGAMMTVVVAACSYFFGIIFGSLFAAAKLSRFWSLRLLGDVYTTVVRGVPELL 71

Query: 64  LILLIFYGGQDIINRVAP-LLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIPK 122
           +I L+F+GG  ++  +A  L GYE YI+    + G+  +    GAY +E  R A L +P 
Sbjct: 72  IIFLVFFGGGTLLRTIANGLFGYEGYIEPPIFVIGVLCISVSAGAYATEVIRAAVLAVPP 131

Query: 123 GQAEAGVAYGMSPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAK 182
           GQ EA  + GM P     R+ +PQ  R A+PG  N W    K T+LISVVGL ++M  A 
Sbjct: 132 GQIEAAKSIGMGPWLRLRRVLIPQAARFALPGLGNVWQFTLKDTSLISVVGLVEIMRTAA 191

Query: 183 QAADATREPFTFFLAVAALYLVLTSVSLLALKYLERRYSVGVK 225
             A +T++PFTF++    ++L+L+SVS       E+  + GV+
Sbjct: 192 MGAGSTKQPFTFYITAFVIFLLLSSVSNRGFLKAEKWANRGVR 234