Pairwise Alignments

Query, 232 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 236 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  197 bits (500), Expect = 2e-55
 Identities = 102/216 (47%), Positives = 142/216 (65%), Gaps = 7/216 (3%)

Query: 18  GLLTTLKLLAISLFFGLLAAIPLGLMRVSRQPVVNLAAWLYTYVIRGTPMLVQLFLIYYG 77
           GL  T+ LL  +L  G L +IPL + RVSR+ +V      YTY+ RGTP+ +QL + Y G
Sbjct: 22  GLAMTMWLLTTALVIGFLVSIPLSIARVSRKRLVRWPVQFYTYLFRGTPLYIQLLICYTG 81

Query: 78  LAQFEAVRESIFWPLLSS----ATFCACLAFGINTSAYTAEIIAGSLKATPHGEIEAAKA 133
           +    AVRE    PLL +    A  C  LAF +NT AYT EI AG++++  HGE+EAAKA
Sbjct: 82  IYSLAAVREQ---PLLDAFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMAHGEVEAAKA 138

Query: 134 MGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGAARTVNAQYYL 193
            G+S  K+Y  +++PSALRR+LP YSNEVI+ML +T++A   T+ DI   AR  N+  ++
Sbjct: 139 YGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATIPDILKVARDANSATFM 198

Query: 194 PFEAYITAGVFYLCLTFILVRLFKMAERRWLGYLAP 229
            F+++  A + YL +TF LV LF++AERRWL +L P
Sbjct: 199 TFQSFGIAALIYLTVTFALVGLFRLAERRWLAFLGP 234