Pairwise Alignments

Query, 232 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

 Score =  200 bits (509), Expect = 2e-56
 Identities = 97/218 (44%), Positives = 146/218 (66%), Gaps = 1/218 (0%)

Query: 4   DYNVVWEALPMYFGGLLTTLKLLAISLFFGLLAAIPLGLMRVSRQPVVNLAAWLYTYVIR 63
           D  ++ E+ P     + TTL L  ISL  G + ++P+ LMR+S+  +V+  A+ Y Y+IR
Sbjct: 2   DIQLIIESFPKLLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIR 61

Query: 64  GTPMLVQLFLIYYGLAQFEAVRESI-FWPLLSSATFCACLAFGINTSAYTAEIIAGSLKA 122
            TP+LVQ+FLIYYG AQF  V   +  W       FCA LA  +NT+AYT+EII G +++
Sbjct: 62  STPLLVQMFLIYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQS 121

Query: 123 TPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITG 182
              G+IEAA+A+GMS    +RRI+ P A+R+ALP Y NEV++++++TSLAS +T++++TG
Sbjct: 122 VSLGQIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTG 181

Query: 183 AARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAE 220
            A+ + +  Y P E +I AG  YL +TF++ RL  +AE
Sbjct: 182 LAKQIISATYSPVEVFIVAGAIYLFITFVVSRLVMLAE 219