Pairwise Alignments

Query, 254 a.a., histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 276 a.a., amino acid transporter from Pseudomonas simiae WCS417

 Score =  314 bits (805), Expect = 1e-90
 Identities = 166/253 (65%), Positives = 201/253 (79%), Gaps = 3/253 (1%)

Query: 3   KLEVQDLHKRYGSHEVLKGVSLAAKAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKILL 62
           KL+V+ +HKRYG HEVLKGVSL A+ GDVIS+IG+SGSGKST LRCIN LEQP AG I L
Sbjct: 26  KLQVEGIHKRYGEHEVLKGVSLNARQGDVISLIGASGSGKSTMLRCINFLEQPDAGVITL 85

Query: 63  NNEELKLVPGKDGALKAADPRQLQRMRSRLSMVFQHFNLWSHMTALENIIEAPVHVLGVN 122
           +   +++  G+ G  +A    QLQ +R+RL+MVFQHFNLWSHMT LENI  AP  VL V+
Sbjct: 86  DGISIEMRQGRAGT-RAPHQDQLQNLRTRLAMVFQHFNLWSHMTVLENITMAPRRVLDVS 144

Query: 123 KKEALEKAEHYLAKVGVAHR-KDAFPGHMSGGEQQRVAIARALAMEPEVMLFDEPTSALD 181
             EA ++A  YL KVG+  R  D +P  +SGG+QQRVAIARALAMEPE++LFDEPTSALD
Sbjct: 145 AAEAEKRARMYLDKVGLPSRVADQYPAFLSGGQQQRVAIARALAMEPEIILFDEPTSALD 204

Query: 182 PELVGDVLKVMQALAQEGRTMVVVTHEMGFAREVSNQLVFLHKGLVEETGCPREVLANPQ 241
           PELVG+VLKV+Q LA+EGRTM++VTHEMGFAR+VS+Q++FLH+G VEE G  R +L  P 
Sbjct: 205 PELVGEVLKVIQTLAEEGRTMLMVTHEMGFARQVSSQVLFLHQGRVEEHGDAR-ILDQPN 263

Query: 242 SERLQQFLSGSLK 254
           SERLQQFLS  LK
Sbjct: 264 SERLQQFLSNRLK 276