Pairwise Alignments

Query, 254 a.a., histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 256 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  245 bits (626), Expect = 6e-70
 Identities = 129/246 (52%), Positives = 173/246 (70%), Gaps = 3/246 (1%)

Query: 4   LEVQDLHKRYGSHEVLKGVSLAAKAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKILLN 63
           +E+++L K +G + VLK +SL    G V++IIG SGSGKST LRCINLL  P+AG++ + 
Sbjct: 6   IEIRNLKKAFGQNVVLKDISLQVGRGQVVAIIGPSGSGKSTLLRCINLLSVPNAGRVTVG 65

Query: 64  NEELKLVPGKDGALKAADPRQLQRMRSRLSMVFQHFNLWSHMTALENIIEAPVHVLGVNK 123
            + ++   G    L   + R L R R+   MVFQHFNL+ HMT L N++E PV VL   K
Sbjct: 66  EQTIEF-NGVHTTLP--NERALARFRASTGMVFQHFNLFPHMTVLRNVMEGPVTVLKTPK 122

Query: 124 KEALEKAEHYLAKVGVAHRKDAFPGHMSGGEQQRVAIARALAMEPEVMLFDEPTSALDPE 183
            +A  +A   LAKVG+  R D FP  +SGG++QRVAIARALAM+P VMLFDE TSALDPE
Sbjct: 123 PQAEAEARALLAKVGLLERADYFPDKLSGGQKQRVAIARALAMKPAVMLFDEATSALDPE 182

Query: 184 LVGDVLKVMQALAQEGRTMVVVTHEMGFAREVSNQLVFLHKGLVEETGCPREVLANPQSE 243
           LVG+VL V++ LA++G TM++VTHE+GFAREV++Q++F+  G+V E+G P  V+ NP   
Sbjct: 183 LVGEVLGVIKGLARDGMTMILVTHEIGFAREVADQVIFMRDGVVAESGPPEAVIDNPTQA 242

Query: 244 RLQQFL 249
             Q FL
Sbjct: 243 ATQAFL 248