Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  134 bits (336), Expect = 4e-36
 Identities = 81/223 (36%), Positives = 117/223 (52%), Gaps = 5/223 (2%)

Query: 85  FSAALKQLARSGCLIGGLSAGVYPLAMLGLLDGYRAAVHWRWQDDFAERFPKVIATSHLF 144
           F   L+  A  G  + GL  G + L   GLL GYR A+H   +    E       TS  +
Sbjct: 114 FIHLLRGAAEQGISLAGLWNGAWFLGRAGLLQGYRCAIHPEHRPALGEVSKATHVTSEPY 173

Query: 145 DWDRDRLTACGGMAVTDLLLAVLARDHGAELAGAVSEELVVERIREGGERQRIPLQNRLG 204
             DRDRLTA        + L  +   HG  L   + + L  E  R     +RI     + 
Sbjct: 174 VIDRDRLTASSPSGAFHMALDWIKGLHGKALVEGIEDILAFEESRY----RRIKPTENVS 229

Query: 205 SSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNK 264
            S P L + V LM+AN+EEPL  D++A +   SRRQLER+FK+ L   P +YY+ELR+ +
Sbjct: 230 VSAP-LREVVKLMDANLEEPLELDQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRVTE 288

Query: 265 ARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATPREDR 307
           AR++L  T  S +++ ++CGF S  HFS  Y ++FG  P +++
Sbjct: 289 ARRLLQHTELSQVEVLVACGFVSPSHFSKCYSSYFGYRPSKEK 331