Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

 Score =  223 bits (569), Expect = 4e-63
 Identities = 131/319 (41%), Positives = 186/319 (58%), Gaps = 22/319 (6%)

Query: 2   TTQRIGFLIWPSTRPLTLALAEEVLLVAQRVHPDVVYELVFLQAEPAQEGAWRLPGEPWT 61
           T Q IGFL+  +   ++LA A E L +A ++    +Y    L  +  Q   W   G   T
Sbjct: 15  TPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGGQ--VWASDGLQIT 72

Query: 62  GRLEGCHKLFLLADEPP-------AAMGAAFSAA------LKQLARSGCLIGGLSAGVYP 108
                      +++ PP         +G   S        L+  AR    +G +  G + 
Sbjct: 73  PDAA-------ISNAPPIDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWA 125

Query: 109 LAMLGLLDGYRAAVHWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMAVTDLLLAVLA 168
           LA  GLLDG+  +VHW       E FP+V  ++ LF  DR+R T+ GG A  D++L +++
Sbjct: 126 LACAGLLDGFDCSVHWECLAAMQEAFPRVNMSTRLFTLDRNRFTSSGGTAPLDMMLHLIS 185

Query: 169 RDHGAELAGAVSEELVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTD 228
           RDHG EL+ A+SE  V ERIR   + QR+PL++ LG++ PKL + V LMEAN+EEP+  D
Sbjct: 186 RDHGRELSAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLD 245

Query: 229 EIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSG 288
           E+A +V VSRRQLER+F++YL+  PS+YYL+LRL +ARQ+L QT  SII++   CGF S 
Sbjct: 246 ELAVYVSVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVST 305

Query: 289 PHFSSAYRNFFGATPREDR 307
           PHFS  YR +FG  PR++R
Sbjct: 306 PHFSKCYREYFGIPPRDER 324