Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 398 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

 Score =  126 bits (317), Expect = 8e-34
 Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 5/230 (2%)

Query: 87  AALKQLARSGCLIGGLSAGVYPLAMLGLLDGYRAAVHWRWQDDFAERFPKVIATS-HLFD 145
           A L+  A  G  + G+  G + L+ +GL+   R  V W    DF E FP ++  +  L+ 
Sbjct: 130 AYLRAAASYGVTLVGVCTGSFVLSRIGLMKNRRCCVSWYHHRDFIEEFPDLVPVADQLYV 189

Query: 146 WDRDRLTACGGMAVTDLLLAVLARDHGAELAGAVSEELVVERIREGGERQRIPLQNRLGS 205
            DRDR+T  GG  V DL   ++ R  G   A      L++++ R   + Q  P    +  
Sbjct: 190 VDRDRITCSGGAGVADLAAFLIERHLGRATAQKTMHILLIDKARPASQSQPQP-PTVVEI 248

Query: 206 SHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNKA 265
           ++ ++ +A+LLME +I +PL+ +EI   + VS RQ ER+F+  +   P+ YY  LRL   
Sbjct: 249 TNDRVRRALLLMEQHISDPLSVEEIVHRLNVSTRQFERLFRLAVGTSPATYYRSLRLRYG 308

Query: 266 RQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATPREDRNQRRSSSP 315
             +L  T +S+  I    GF+   HFS  +R  FG +P E    RR++ P
Sbjct: 309 HWLLRNTKRSVTAIANEAGFADCAHFSRQFRELFGVSPSE---VRRTAGP 355