Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 69/296 (23%), Positives = 137/296 (46%), Gaps = 6/296 (2%)

Query: 1   MDLRQIKTFVVVAEELHFGRAAARLQIAQPAVTAQIQALERQLGVPLLIRSTRRVQLTEA 60
           ++ R ++ F+ VAEELHF +AA RL +AQP ++  I  LE +LG  LL+R+ R V+LT A
Sbjct: 2   IETRLLRQFIAVAEELHFHKAAQRLHMAQPPLSQAINRLEEKLGFGLLLRNKRGVRLTAA 61

Query: 61  GMIFNSRCIDILRDIDRTCLATQAVAGKDLHQITIGTIYPATFGVLPNFVSRINQRFPEA 120
           G  F       L ++++     + V+     ++TI  I  A +  L N + R  + +P  
Sbjct: 62  GAAFLDTAYRTLAELEQGIEYARNVSAGVSGKLTITAISIAYYDSLLNRLRRFRETYPNV 121

Query: 121 RIHIHNGNTVGIVREIERGNINLGFIRPVE-NIGSLRWQSIHREKYLLAIARENPLSSKS 179
           ++ I    +    + +  G  ++GF+R +   +G+L  + +  E+ ++A+   +P++   
Sbjct: 122 QLTIREMPSASQAKALLAGEADIGFMRRLPLPVGTLEARLLLDEQIVMALPASHPMARFE 181

Query: 180 TVTPDDLRKQKIIAFSRAYNSQTDDNFPEEFKKYDLNQQVVYSCNDTQAMLAMITAGIGV 239
            V   +   +  +   +A             +      +VV        +L ++  G GV
Sbjct: 182 AVDLREFADEDFVFTPQALGGGYHAQLVALCESAGFYPKVVQEAAQIHTLLGLVACGFGV 241

Query: 240 GFVP-EWVKSIPGQNFELREVEGLERH----IGLGLAWSVDDPTVNRDSIIELCRT 290
             VP  +V+S P +  +   +  ++      +GL + W+  + +    + I +  T
Sbjct: 242 ALVPASFVRSTPRERVQFCPIRPIDDQPPPGLGLYMKWNAQNASPALANFIAMFET 297