Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 432 a.a., porin from Pseudomonas simiae WCS417

 Score =  186 bits (472), Expect = 1e-51
 Identities = 141/462 (30%), Positives = 209/462 (45%), Gaps = 57/462 (12%)

Query: 4   VTKVKRILAALACGTL-----AQQGYAVGFLDDSKASISSRTLYYDGDQR---STGGADQ 55
           V K   I  A++ GT      + Q  + GF++DS  SI++R LY+  D R   S  G+  
Sbjct: 3   VMKWSMIALAVSAGTTQFAMASAQSDSKGFVEDSTFSINTRALYFSRDFRNNPSGPGSQS 62

Query: 56  RQTLTGLRLD--FQSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSP 113
           R   TGL  +  +QSG+T+G +G+G+D+  L G  L  G           + P  +DG  
Sbjct: 63  RAEETGLGFNALYQSGFTQGTIGVGVDVIGLLGVKLDSGKGRAGTG----LFPTGSDGRS 118

Query: 114 VDNWSRIGGNARFKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTL 173
            D++S+ GG  +F+ S T LK G+  T   PV  S+D RLLP   QG ++TSNE + L L
Sbjct: 119 QDDYSKGGGAVKFRISDTVLKVGDQYT-TAPVFASDDSRLLPELPQGISITSNEIKGLKL 177

Query: 174 NGGFLNRAIGRASSNWAGISGGGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNF 233
            GG    ++ +  +    +   G   +D   F GG ++         YYA  EDY+ + +
Sbjct: 178 EGGHFTSSVAQNQTYHDSL---GLTKTD---FVGGVYSFTPEFTGSLYYAKTEDYFRKYY 231

Query: 234 LGLIHSFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENG-------KIDNTTW 286
             L  +  +   QS   D   + + SDG+        L+  Y +NG       K+DN  +
Sbjct: 232 SNLNWTHALSDDQSFALDFNIYDTKSDGE-------GLQRAYKDNGLPFAERTKLDNRAF 284

Query: 287 SLAFTYKAGGHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNS 346
           SL   Y  G H  TL  Q+V+    +        VDG G         +++L   +  + 
Sbjct: 285 SLQGAYTIGAHTFTLAAQKVTGDGDY-----GYGVDGGG---------TVFLANSIARSD 330

Query: 347 FTRAGENSTFGLYSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYV 406
           F   GE S    Y  + A  G+PGL     YV+G    G    TT    EWE D    YV
Sbjct: 331 FNAEGEKSYQARYDINMATFGIPGLSFMTRYVTGS---GANTATTSNGKEWERDIEAKYV 387

Query: 407 LQSGTFKGLGFTLRKGVFRTGLPDSTL---KDQDQVRFFVNY 445
           +QSG  K L   +R+  +R+   D         D++R   NY
Sbjct: 388 IQSGPAKDLSLRIRQATYRSS--DGVYYGSSSIDELRLIANY 427