Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  161 bits (408), Expect = 3e-44
 Identities = 139/469 (29%), Positives = 198/469 (42%), Gaps = 57/469 (12%)

Query: 6   KVKRILAALACGTLAQQGYAVGFLD--DSKASISSRTL------YYDGDQRSTGGADQRQ 57
           K   +LA   C  ++Q  +A    D  DSK  I   ++      YY    R  G AD   
Sbjct: 3   KQSSLLALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRNREGGRADNID 62

Query: 58  TLTGLRLDFQSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNW 117
              G  L++ SG+T+G +G G+D  A  G  L    +  +A T N   P    G P D +
Sbjct: 63  WTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDATHA--DAGTGNL--PTDRHGDPEDAY 118

Query: 118 SRIGGNARFKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGF 177
             +G   + K SKT+LK G+ +    PV  +   RLLP +  G  LTS+E   L L  G 
Sbjct: 119 GSVGAAVKIKVSKTQLKFGD-MQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGH 177

Query: 178 LNRAIGRASSN--------WAGISGGGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYY 229
                   +SN        +A I+   A      +F GG +    +L    Y   LED +
Sbjct: 178 FTSTNSGMTSNHDHDIYATYANIAANSA------SFLGGKYTFSPSLSATVYAGELEDIW 231

Query: 230 SQNFLGLIHSFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLA 289
            Q +  L +   +   QSL  D   +++             L  G  + G I+NTT+SLA
Sbjct: 232 RQYYTNLNYVIPLVHDQSLALDGNLYRT-------------LDTGSAKAGAINNTTYSLA 278

Query: 290 FTYK-AGGHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFT 348
             Y     H LTL  Q+V   + F  + + N         GEGG  S+YL   V    F 
Sbjct: 279 AAYSFLQAHTLTLSFQKVHGDTPFDYIGTGN------NGAGEGG-DSVYLANSVQWGDFN 331

Query: 349 RAGENSTFGLYSYDFAALGVPGLKAGWTYVSGKDIRGT----GNTTTGRYNE----WESD 400
             GE S    Y  + A+ GVPGL     Y++G DI GT     +   G Y +     E+D
Sbjct: 332 GPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDINGTHTPDHSAYAGDYGDDGAHHETD 391

Query: 401 YRLDYVLQSGTFKGLGFTLRKGVFRTGLPDSTLKDQDQVRFFVNYTYAL 449
               YV+QSG  K L   +R  +      D    D +++R  V+Y + L
Sbjct: 392 LEAKYVIQSGPAKNLSLRVRDAIVAAN-ADQRDGDLNELRLIVDYPFTL 439