Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 427 a.a., porin from Pseudomonas simiae WCS417

 Score =  212 bits (540), Expect = 2e-59
 Identities = 138/437 (31%), Positives = 216/437 (49%), Gaps = 52/437 (11%)

Query: 28  FLDDSKASISSRTLYYDGDQRSTGGADQRQTLT-GLRLDFQSGYTEGVVGLGLDLQALAG 86
           F+ DSKA +  +  Y++ D R   G  +R+    G  L+ +SG+TEG VG G+D+  + G
Sbjct: 29  FIKDSKADLDLKNYYFNRDYREDAGQSKREEWAQGFILNLKSGFTEGTVGFGVDVVGMLG 88

Query: 87  FTLSGGTSPHNASTVNTVSPVTTDGSPV------DNWSRIGGNARFKYSKTELKAGNALT 140
             L        +  ++  +  T  G P       D +S+ G   + +++++EL++G  L 
Sbjct: 89  LKLDSSPDRSGSGLLSRDNDATP-GKPSYSKRAHDEYSKYGVTGKVRFAQSELRSGYLLP 147

Query: 141 FNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASSNWAGISGGGAKG- 199
            +LP L  N  RL P +F+G  +TS +   L L GG +++   R S+ +  +      G 
Sbjct: 148 -DLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTKQRESTEYEDMGLTSQSGA 206

Query: 200 ------SDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSFDMGVGQSLTTDLR 253
                 SD F FAGGD+ +   + L Y++A LED Y Q+F+GL +SF +G G +L TD+R
Sbjct: 207 YKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQHFVGLKNSFALG-GGTLKTDIR 265

Query: 254 YFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHALTLGHQQVSDKSGFA 313
           YF +D             ++G    GK+DN   S    +   GH+L  G+Q+    + F 
Sbjct: 266 YFDAD-------------KSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQYGDTPFT 312

Query: 314 TVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFAALGVPGLKA 373
            V+ +N                 YL+++  +++F++  E      Y +DFAALGVPGL  
Sbjct: 313 YVDGTNT----------------YLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTF 356

Query: 374 GWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFTLRKGVFRTGLPDSTL 433
              +  G   +  G    GR  EWE D  L YV QSGT KG+    R G+ +     + L
Sbjct: 357 STRWAKGDQAQVKGFAGEGR--EWERDIDLGYVFQSGTLKGVSLRWRNGLSKA----NYL 410

Query: 434 KDQDQVRFFVNYTYALW 450
           +D ++ R  V YT ALW
Sbjct: 411 RDMNENRVIVGYTVALW 427