Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 430 a.a., porin from Pseudomonas simiae WCS417

 Score =  234 bits (598), Expect = 3e-66
 Identities = 155/434 (35%), Positives = 222/434 (51%), Gaps = 53/434 (12%)

Query: 28  FLDDSKASISSRTLYYDGDQRSTGGADQRQT---LTGLRLDFQSGYTEGVVGLGLDLQAL 84
           F +DS A++ +R +Y++ D R    A Q +      G  L+ QSGYT+G VG G+D   +
Sbjct: 39  FFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFMLNLQSGYTDGTVGFGVDALGM 98

Query: 85  AGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIGGNARFKYSKTELKAGNALTFNLP 144
            G  L   +SP    T   + P   DG   D +S++G   + K S TELK G+ +   LP
Sbjct: 99  LGVKLD--SSPDRTGT--GLLPTHDDGRAADEYSKLGLTGKVKISATELKIGSLIP-ELP 153

Query: 145 VLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASSNWAGIS--------GGG 196
           +L  NDGR+LP +F G  +TS EF+NL   GG L++A  R  +N+  I+          G
Sbjct: 154 ILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDIALNNKNSRFVSG 213

Query: 197 AKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSFDMGVGQSLTTDLRYFK 256
           A G   F F G D+     +   Y++A L+D Y Q+FLGL+ S  MG G +  TDLR   
Sbjct: 214 ATGKH-FNFGGADYQFADKITGSYHFAQLDDVYRQHFLGLVASRPMGPG-TFGTDLRLAI 271

Query: 257 SDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHALTLGHQQVSDKSGFATVN 316
           SD               G    GKIDNT+ +  F+Y   GH L+ G+Q +S  S F  V+
Sbjct: 272 SDD-------------TGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVD 318

Query: 317 SSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFAALGVPGLKAGWT 376
            S+                 YL   V +N F  A E S    Y +DFA LG+PGL     
Sbjct: 319 GSDP----------------YLVNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSR 362

Query: 377 YVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFTLRKGVFRTGLPDSTLKDQ 436
           Y+SG +I+   N  TG+  EWE +  + YV+Q+GTFK +   LR   +R+   + + +D 
Sbjct: 363 YLSGDNIK-LKNGETGK--EWERNSEIKYVVQTGTFKDVAVRLRNATYRS---NYSARDA 416

Query: 437 DQVRFFVNYTYALW 450
           D++R  V+Y+ ALW
Sbjct: 417 DEMRLLVSYSVALW 430