Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  192 bits (487), Expect = 2e-53
 Identities = 149/451 (33%), Positives = 219/451 (48%), Gaps = 51/451 (11%)

Query: 8   KRILAALACGTLAQQGYAV--GFLDDSKASISSRTLY----YDGDQRSTGGADQRQTLTG 61
           +R+L A A  +LA    A   GFL+D+ A+++ R  +    Y    ++ GGA  ++    
Sbjct: 7   RRLLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGA--QEWTQS 64

Query: 62  LRLDFQSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIG 121
             LD +SG+T+G VG G+D+  L    L GG        +    P+  DG P D + R+G
Sbjct: 65  FILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLL----PLDHDGRPADEFGRLG 120

Query: 122 GNARFKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRA 181
              + + SKTE+K G  +   LP+L S+DGR LP + +G  +TS E + LTL GG     
Sbjct: 121 VAFKARISKTEVKVGEWMPV-LPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRAN 179

Query: 182 IGRASSNWAGIS--GGGAKGSDGFAFAGGDWNVR-KNLKLQYYYANLEDYYSQNFLGLIH 238
             R  S+   +S  G  A  SD F F G ++    K  ++  + A L+D YSQ F+ LIH
Sbjct: 180 SPRDDSSMNDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIH 239

Query: 239 SFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHA 298
           S  +G   +L  +L +F    DG                 G++DN TWS  F+ K GG+ 
Sbjct: 240 SQPLG-NWTLGANLGFFYGKDDGS-------------ARAGELDNKTWSGLFSAKYGGNT 285

Query: 299 LTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGL 358
             LG Q+++  S +  VN ++           GG     L  D    S+  A E S    
Sbjct: 286 FYLGLQKLTGNSAWMRVNGTS-----------GGT----LANDSYNASYDNAQEKSWQVR 330

Query: 359 YSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFT 418
           + Y+FAALGVPGL     Y+SG ++  TG  T G+  EW  +  L Y +QSG+ K L   
Sbjct: 331 HDYNFAALGVPGLTLMNRYISGSNVH-TGTVTDGK--EWGRESELGYTVQSGSLKNLTVR 387

Query: 419 LRKGVFRTGLPDSTLKDQDQVRFFVNYTYAL 449
           LR    R    D +  + D+ R  V+Y  +L
Sbjct: 388 LRNSSMRR---DYSNNEFDENRLIVSYPISL 415