Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  180 bits (457), Expect = 7e-50
 Identities = 146/452 (32%), Positives = 214/452 (47%), Gaps = 60/452 (13%)

Query: 10  ILAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQR----QTLTGLRLD 65
           I AAL     A++    GF++ ++A++ +R  ++  D     GA  +    +   G  L+
Sbjct: 20  IAAALCAEATAEEA---GFIEGARATLQARNYFFSRDYADIKGASTQSRTQEWAQGFILN 76

Query: 66  FQSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIGGNAR 125
             SGYT+G +G+G+D+  L GF L   +SP +A +   + P    G   D +SR+G   +
Sbjct: 77  ASSGYTQGTLGVGVDVTGLLGFKLD--SSPEHARS--GLLPSLDSGKSADEYSRLGAAIK 132

Query: 126 FKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRA 185
           FK S+TELK G  +  NLPVL+ +D RLLP ++QGA L S EF  LTL+ G       R 
Sbjct: 133 FKVSQTELKVGELMP-NLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFRSTSLRD 191

Query: 186 SSN----WAGISGG------GAKGSDGFAFAGGDWNVRKN-LKLQYYYANLEDYYSQNFL 234
           SSN    +A ++            SD F + G D+    N   +  + A LED Y Q F 
Sbjct: 192 SSNSQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDIYQQRFY 251

Query: 235 GLIHSFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKA 294
              H+  +G   +L  +  YF +  DG     S+ A        G  DN      F+ K 
Sbjct: 252 SFKHAEPLG-SWTLGVNAGYFDAREDG-----SKVA--------GDYDNHALFSLFSAKT 297

Query: 295 GGHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENS 354
           GGH   +G+QQ+    GF  V ++    G   P  E                F+  GE S
Sbjct: 298 GGHTFYVGYQQIGGDDGFIQVGANTNPMGNTLPTYE----------------FSAPGERS 341

Query: 355 TFGLYSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKG 414
               + Y+F ALG+PGL +   YV G+D+  TG    GR  + E D  L YV+QSG   G
Sbjct: 342 WQVRHDYNFVALGLPGLTSTLRYVKGRDVE-TGLGFEGR--DRERDLDLAYVVQSGPLAG 398

Query: 415 LGFTLRKGVFRTGLPDSTLKDQDQVRFFVNYT 446
           LG  +R  + R+    +   D D+ R  ++YT
Sbjct: 399 LGIRVRNVMARS----NYRTDIDENRLILSYT 426