Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  188 bits (478), Expect = 2e-52
 Identities = 149/435 (34%), Positives = 208/435 (47%), Gaps = 49/435 (11%)

Query: 20  AQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQR--QTLTGLRLDFQSGYTEGVVGL 77
           AQ+G   GFL+D+K  ++ R  Y++ D R  G A  +  +   G    F SGYT G++G 
Sbjct: 27  AQEG---GFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFIFKFSSGYTPGLIGF 83

Query: 78  GLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIGGNARFKYSKTELKAGN 137
           GLD  AL G  L  G      ++ + + PV  DG   D++ R G  A+ + S TELK G 
Sbjct: 84  GLDGIALFGVKLDSG----GGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSATELKVGE 139

Query: 138 ALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASSNWAGISGGGA 197
            L  ++P+L  +DGRLLP +F+GA L S E E L+L  G       R SS+   +S   A
Sbjct: 140 LLP-DIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDLSAWAA 198

Query: 198 KG--SDGFAFAGGDWNVRKNLKL-QYYYANLEDYYSQNFLGLIHSFDMGVGQSLTTDLRY 254
            G  SDGF +AG ++   +   L   +++ LED Y Q++  L+HS  +G   +L  +L Y
Sbjct: 199 PGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVG-EWTLGANLGY 257

Query: 255 FKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHALTLGHQQVSDKSGFAT 314
           F    DG+                G I + T     +    GH L LG Q+VS  S + +
Sbjct: 258 FIDRDDGQ-------------ARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMS 304

Query: 315 VNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFAALGVPGLKAG 374
           V  S+     GR  G           D+   +F+ A E S    Y Y+FAALGVPGL A 
Sbjct: 305 VYGSS-----GRTLG----------NDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAM 349

Query: 375 WTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFTLRKGVFRTGLPDSTLK 434
             Y  G++   T   + G+  EWE D  ++Y  QSG  K L   L     R     S   
Sbjct: 350 VRYGHGENAT-TAAGSNGK--EWERDAEVNYTFQSGALKNLNIRLNNATNRR----SFNS 402

Query: 435 DQDQVRFFVNYTYAL 449
           D DQ R  V+Y   L
Sbjct: 403 DLDQTRLIVSYPLTL 417