Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  164 bits (416), Expect = 4e-45
 Identities = 128/466 (27%), Positives = 201/466 (43%), Gaps = 61/466 (13%)

Query: 11  LAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQ---RQTLTGLR---- 63
           LA +    +A +  A GF++ S  S+ +R  Y++ D R +        +Q   G      
Sbjct: 15  LAGVGSQVVAAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHNPSKQADNGYSEAWG 74

Query: 64  ----LDFQSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSR 119
                 F+SG+T+G VG+GLD  A+ G  L  G   +   +   V PV  DG   D +++
Sbjct: 75  HAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLPVDRDGQARDEYTK 134

Query: 120 IGGNARFKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLN 179
           +GG A+ +   T LK G+    N PV+ + D RLLP SF+G  L ++  ++LTL  G L+
Sbjct: 135 VGGAAKLRLFDTVLKVGDVFPAN-PVVAAGDSRLLPESFRGVTLENSSIKDLTLQAGRLH 193

Query: 180 RAIGRASS----NWAGISGGGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLG 235
                 SS    N+    GG    S   A+ GGD+ + +++ +  + + L+D ++Q + G
Sbjct: 194 AMSQPMSSDLRENFVTFYGGPV-DSPWIAYGGGDYRLNEHVSVSLFSSRLKDAWNQYYAG 252

Query: 236 LIHSFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAG 295
              S+ +    +L     Y+K             A+  G    G  DN  WS     + G
Sbjct: 253 TSLSWPLSEALALIGGFNYYK-------------AVDEGQQRLGAFDNDIWSAKLGVRFG 299

Query: 296 GHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENST 355
            H L L HQ+ +    F  +  S+               S++L   +  + F    E S 
Sbjct: 300 AHTLALTHQRNNGDDDFDYLRQSD---------------SIFLDNSIQYSDFNAPKERSW 344

Query: 356 FGLYSYDFAALGVPGLKAGWTYVSGKDIRGT------------GNTTTGRYNEWESDYRL 403
              Y  + AA GVPGL     Y  G D   +            GN  T +   WE D  +
Sbjct: 345 MLRYDLNMAAYGVPGLSFMTRYGKGNDADYSNANATYMRRDVAGNPLTDQ-KRWERDIEV 403

Query: 404 DYVLQSGTFKGLGFTLRKGVFRTGLPDSTLKDQDQVRFFVNYTYAL 449
            YV+Q+G  K L   +R+   R    +S   D D+VR  V Y  ++
Sbjct: 404 KYVVQTGAAKDLSLRVRQATTRATAFES---DLDEVRMIVEYPLSI 446