Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  189 bits (479), Expect = 2e-52
 Identities = 155/452 (34%), Positives = 223/452 (49%), Gaps = 58/452 (12%)

Query: 11  LAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQR----QTLTGLRLDF 66
           L  L+   LA +G   GF +DSKA++S+R  Y+  D     GA+++    +   G  LDF
Sbjct: 11  LTLLSQPLLAAEG---GFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILDF 67

Query: 67  QSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIGGNARF 126
           +SGYT G VG G+D   L G  L   +SP   +T   + PV  DG   D +SR+    + 
Sbjct: 68  KSGYTPGPVGFGVDALGLLGIKLD--SSPDRTNT--GLLPVHGDGRAADEYSRLAPTFKA 123

Query: 127 KYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNR------ 180
           + SKTEL+AG  L  NLPVL  +D RLLP ++QG +L+S+E + LT+  G L        
Sbjct: 124 RLSKTELRAGE-LQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNE 182

Query: 181 -AIGRASSNWAGISGGGAKGSDGFAFAGGDWNVRKN-LKLQYYYANLEDYYSQNFLGLIH 238
              G+ ++    +    A+ SD F + GGD+    N   +  +Y  LED Y Q F+GL H
Sbjct: 183 GGDGKMNAMLGHVPMRQAE-SDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLKH 241

Query: 239 SFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHA 298
           S  +G    L+ +L YF +   G        AL       G IDN  +   FT + GGH+
Sbjct: 242 SKPVG-DWVLSANLGYFTAREQGD-------ALL------GNIDNQAFFSLFTARHGGHS 287

Query: 299 LTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGL 358
              G+Q +   S F  V ++    G   P  E      + YTD          E S    
Sbjct: 288 FHAGYQGIYGDSPFPRVFANISPLGNEVPTYE------FAYTD----------ERSYQVR 331

Query: 359 YSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFT 418
           Y Y+FAA+GVPGL A   Y++G ++  TG    GR  + E D  + Y +QSG  KGLG  
Sbjct: 332 YDYNFAAMGVPGLTATVRYITGNNV-DTGLGYEGR--DRERDLDIGYAVQSGALKGLGIR 388

Query: 419 LRKGVFRTGLPDSTLKDQDQVRFFVNYTYALW 450
           +R  + R+    +   D D+ R  + YT+ L+
Sbjct: 389 VRNAMARS----NYRSDIDENRLTLVYTWQLF 416