Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 449 a.a., putative OprD family outer membrane porin from Pseudomonas putida KT2440

 Score =  181 bits (460), Expect = 3e-50
 Identities = 138/450 (30%), Positives = 203/450 (45%), Gaps = 66/450 (14%)

Query: 27  GFLDDSKASISSRTLYYDGDQRS-----TGGADQRQTLT-----GLRLDFQSGYTEGVVG 76
           GF+D ++  + +R  ++  D R+          +RQ+L      G+  + QSG+T G VG
Sbjct: 29  GFIDGTRVHVLNRNFFFSQDYRNGDFTLNPNNGERQSLHREWGHGIIANLQSGFTRGTVG 88

Query: 77  LGLDLQALAGFTLSGGTSPHNASTVNTV--------SPVTTDGSPVDNWSRIGGNARFKY 128
            G+D+Q L G  L GG    N +  N V        S    DG P D++ ++G   + + 
Sbjct: 89  FGVDVQGLVGLKLDGG----NGAVGNGVGVPGIVSRSGSNFDGEPKDSYGKVGTALKVRA 144

Query: 129 SKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASSN 188
             TEL+ G+    + PVL ++D RLLP + +G    +N  + L+L GG L  +  R +SN
Sbjct: 145 FDTELRYGDVSPTS-PVLHASDIRLLPQTLRGFIFNNNSLDGLSLQGGKLESSSDRNASN 203

Query: 189 WAGISG----GGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSFDMGV 244
             G  G    G  KG++   + GGD+     L L+ + + L+D ++Q+F  + H   +G 
Sbjct: 204 HRGDLGTVYAGRIKGANDVVYLGGDYRFNDQLTLRLHSSRLDDVWNQSFFSVDHVQPLGS 263

Query: 245 GQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHALTLGHQ 304
             SL T L Y+++        DS  AL       G+IDN +WS+     AG H   L + 
Sbjct: 264 ELSLKTGLNYYRT-------RDSGQALA------GQIDNDSWSVHAGLAAGAHGFKLSYT 310

Query: 305 QVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFA 364
           ++   + F  V                    L L     V+ F    E +    Y YDFA
Sbjct: 311 RIDGDTPFDYV---------------WNTYDLQLDAASQVSDFNNPNERAWEARYDYDFA 355

Query: 365 ALGVPGLKAGWTYVSGKDIRGT---------GNTTTGRYNEWESDYRLDYVLQSGTFKGL 415
            LGVPGL     YV G DI GT           T  GR+  WE +  L YVLQSG  K L
Sbjct: 356 PLGVPGLSLTARYVRGTDIDGTRAGGAYSYFNGTEDGRH--WERNLWLKYVLQSGPAKDL 413

Query: 416 GFTLRKGVFRTGLPDSTLKDQDQVRFFVNY 445
            F L +   R G       + D++R  V Y
Sbjct: 414 SFNLMQATHRVGGDHVAESNVDELRLIVQY 443