Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  232 bits (592), Expect = 2e-65
 Identities = 155/457 (33%), Positives = 224/457 (49%), Gaps = 53/457 (11%)

Query: 4   VTKVKRILAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQRQT---LT 60
           + +   I +ALA   +A    A  F +DS A+  +R +Y++ D R    A Q +      
Sbjct: 16  IARPSAIASALALAGVAPMSQAA-FFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQ 74

Query: 61  GLRLDFQSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRI 120
           G  L+F+SGYT+G VG GLD   + G  L   +SP    T + + P   DG   D +S++
Sbjct: 75  GFILNFESGYTDGTVGFGLDALGMLGIKLD--SSPDR--TDSGLLPTHDDGKAADEYSKL 130

Query: 121 GGNARFKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNR 180
           G   + K S+TELK G  +   LP L  NDGR+LP +F+G  LTS E + LT  GG +++
Sbjct: 131 GLTGKVKISQTELKIGTLIP-ELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDK 189

Query: 181 AIGRASSNWAGIS-------GGGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNF 233
           A  R  +NW  ++        GG   +D  A  G D+     +   Y++A L+D Y Q+F
Sbjct: 190 AKDRNDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQHF 249

Query: 234 LGLIHSFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYK 293
           +G++ +   G G +L  DLR   SD  G               + G IDNTT +   +Y 
Sbjct: 250 IGMVATQPWGPG-TLGADLRLAMSDDAGA-------------AKAGNIDNTTVNGMLSYA 295

Query: 294 AGGHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGEN 353
            GGH ++   QQ+S +S F  V+ ++                 YL   V +N F  A E 
Sbjct: 296 LGGHKVSAAWQQLSGESAFPYVDGADP----------------YLVNFVQINDFAGADER 339

Query: 354 STFGLYSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFK 413
           S    Y Y+FAALGVPGL     Y+SG ++        G   EWE +  L YV+QSG  K
Sbjct: 340 SWQARYDYNFAALGVPGLTFMTRYISGDNV---SRAAGGEGKEWERNTELKYVVQSGPLK 396

Query: 414 GLGFTLRKGVFRTGLPDSTLKDQDQVRFFVNYTYALW 450
            +   LR   FR+       +D D+VR  V+Y+ ALW
Sbjct: 397 NVAVRLRNATFRSNF----ARDADEVRLLVSYSVALW 429