Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 412 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  182 bits (461), Expect = 2e-50
 Identities = 141/443 (31%), Positives = 210/443 (47%), Gaps = 45/443 (10%)

Query: 10  ILAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQR--QTLTGLRLDFQ 67
           +L A     L     A GF++D KA++  R  Y + +  +      +  +      LD +
Sbjct: 11  LLGAGVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDAR 70

Query: 68  SGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIGGNARFK 127
           SG+TEG +G G+D+  L    L GG   +  + +    P   DG P D++ R+    + +
Sbjct: 71  SGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALL----PRHDDGRPADDYGRLAVAGKAR 126

Query: 128 YSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASS 187
            SKTELK G  +   LP+L S+DGR LP +F+G  +TSNE   LTL GG       R  +
Sbjct: 127 ISKTELKIGEWMPV-LPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDA 185

Query: 188 NWAGISGGGAKGSDGFAFAGGDWNVRKN-LKLQYYYANLEDYYSQNFLGLIHSFDMGVGQ 246
           +   +S GG   SD F F GG++   ++  ++  + A L+D Y Q +L L HS  +G   
Sbjct: 186 SMEDMSYGGGV-SDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVG-DW 243

Query: 247 SLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHALTLGHQQV 306
           +L  +L YF  D DG                 G++DN T+S  F+ K GG    +G Q+V
Sbjct: 244 TLGANLGYFHGDEDGS-------------ERAGQLDNKTYSGMFSAKYGGSTFWVGLQKV 290

Query: 307 SDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFAAL 366
            D   +  VN ++           GG     L  D   +SF  A E S    + ++F  +
Sbjct: 291 -DGDTWMRVNGTS-----------GGT----LANDSYNSSFDNANERSWQVRHDFNFVTV 334

Query: 367 GVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFTLRKGVFRT 426
           GVPGL     Y+SG+D+  +G  T G+  EW  +  L YV+QSG FK L    R    R 
Sbjct: 335 GVPGLTLMNRYISGRDVH-SGGVTDGK--EWVRETELAYVIQSGAFKDLSVKWRNSSIRR 391

Query: 427 GLPDSTLKDQDQVRFFVNYTYAL 449
              D +  + D+ R   NY  +L
Sbjct: 392 ---DYSNNEFDENRLIFNYPLSL 411