Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  165 bits (417), Expect = 3e-45
 Identities = 131/458 (28%), Positives = 206/458 (44%), Gaps = 54/458 (11%)

Query: 10  ILAALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQRQTLTGLRLDFQSG 69
           + A +     A +  A GF++ S  ++  R  Y++ D  + G  D R+   G    F+SG
Sbjct: 14  LTATIPFAAQADEDKADGFIEGSSFNLHFRNAYFNRDNHNAGVRDTREWGQGAVARFESG 73

Query: 70  YTEGVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTD---GSPVDNWSRIGGNARF 126
           YT GVVG GLD  A+ G  L GG    +A T      +  D   G+   ++S  G   + 
Sbjct: 74  YTPGVVGFGLDAHAMLGLKLDGGGG--HAGTSILPEHIKDDGELGAAPHSFSTAGAAVKL 131

Query: 127 KYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFL------NR 180
           K   TELKAG+    N PV+   + R+LP +F+G +LT+   + L L GG +      N+
Sbjct: 132 KAFDTELKAGDLFLTN-PVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQ 190

Query: 181 AIGRASSNWAGISGGGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSF 240
           +  R    + G      K S    +AG  W+  +++    Y A L+D ++Q +    +++
Sbjct: 191 SGHRRIDTYYGSLDEHDK-SKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTY 249

Query: 241 DMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHALT 300
            +    SL   + ++ +   G+       AL       GKIDN T+S+ FT  AG H++T
Sbjct: 250 VVNDLVSLNPGVHFYHTQDTGQ-------ALL------GKIDNNTYSVHFTVNAGFHSVT 296

Query: 301 LGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYS 360
             +Q+V+  + F  +N  +               S+YL    M + F    E S    Y 
Sbjct: 297 AAYQRVNGNTPFDYINLGD---------------SVYLDNSRMYSDFNAPNERSWKLQYG 341

Query: 361 YDFAALGVPGLKAGWTYVSGKD--IRGTGNTTTGRY--------NEWESDYRLDYVLQSG 410
           YDFA +GVPGL    +Y  G+    + T +TT   Y          WE D  + YV Q G
Sbjct: 342 YDFAGVGVPGLSTSLSYSRGEADLTKATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEG 401

Query: 411 TFKGLGFTLRKGVFRTGLPDSTL---KDQDQVRFFVNY 445
             K L   +R    R     +++    D D++R  V+Y
Sbjct: 402 DLKDLSVLVRYATHRGSQGYASIDSNSDNDELRVIVDY 439