Pairwise Alignments

Query, 450 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 4e-42
 Identities = 117/450 (26%), Positives = 188/450 (41%), Gaps = 61/450 (13%)

Query: 27  GFLDDSKASISSRTLYYDGDQR------------STGGADQRQTLTGLRLDFQSGYTEGV 74
           GF++ S  ++ +R  Y++ D R            +T G  +      +   F SG+T+G 
Sbjct: 31  GFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWA-HAIISKFNSGFTQGT 89

Query: 75  VGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIGGNARFKYSKTELK 134
           VG G+D  A+ G  L  G   +   +   V PV   G   D ++++GG A+ +   T +K
Sbjct: 90  VGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKGEARDEYTKVGGAAKVRLFDTIVK 149

Query: 135 AGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASSNWAG--- 191
            G+    + PV+ S D RLLP SF+G  + +   + LTL GG L+      SSN      
Sbjct: 150 VGDVFP-STPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMSQPVSSNLNDNFV 208

Query: 192 ISGGGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSFDMGVGQSLTTD 251
              GG   S    + GGD+++  N  +  Y + L+D ++Q + G    + +    +L   
Sbjct: 209 TFYGGPVNSPWIGYGGGDYSINDNWTVSVYASQLKDVWNQYYAGTSVVYPLSDDLALIGG 268

Query: 252 LRYFKSDSDGKNGTDSRYALRNGYNENGKIDNTTWSLAFTYKAGGHALTLGHQQVSDKSG 311
             Y+K+  +GK                G+ DN  WS     + G H L L HQ+ +    
Sbjct: 269 FNYYKAVDEGK-------------KRLGEFDNNIWSAKVGVRYGAHTLALSHQRNNGDDD 315

Query: 312 FATVNSSNVVDGRGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFAALGVPGL 371
           F  +  S+               S+++   +  + F    E S    Y  +F + G+PGL
Sbjct: 316 FDYLRQSD---------------SIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGL 360

Query: 372 KAGWTYV--SGKDIRG----------TGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFTL 419
                Y   SG D              GN    +   WE D  + YV+Q+G  K L F L
Sbjct: 361 TFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQ-KRWERDVEVKYVVQTGPAKDLSFRL 419

Query: 420 RKGVFRTGLPDSTLKDQDQVRFFVNYTYAL 449
           R+   R    +S   D D+ R  + Y  ++
Sbjct: 420 RQATTRATAFES---DLDETRVIIEYPLSI 446