Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  100 bits (248), Expect = 5e-26
 Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 11/252 (4%)

Query: 3   IKLRQIEAFRTVMREGSMVRASAAMAVTQPAISYMISGLEAAVGFPLFNRQGGKLSATPE 62
           ++LR IE F+ + + GS+  A+  + V+QPA++ ++   E  +GFPLF R  GKL  TPE
Sbjct: 1   MRLRHIEIFQAIRQTGSVSAAAQLLHVSQPAVTKVLQHAELQLGFPLFLRVRGKLQPTPE 60

Query: 63  AIQLLAEVDRLYQGLESVEAVAHKIANYGNAELRILITQALSAGRIVNGIGKFAALHPGI 122
           A+ L +EV+++ + L+ V  +A  +       +RI    AL+   +   I ++   +P +
Sbjct: 61  ALALESEVEKVTESLQGVRRLAKSLRRAPGQSVRIGAIPALALSLLPPAILEWKRDYPEM 120

Query: 123 KIDLDVEHRELITHRVNSGQADLGI---LSISPGLEDQSSTLFSSPIICVAS----PDAQ 175
             +L  +H   +  ++   + DL +    S  PGL  Q   L +  ++ +AS     DA+
Sbjct: 121 ACELSGDHSRELVQKLLMREIDLALTLNFSGHPGLTTQ--VLANGVLVALASKGYWSDAE 178

Query: 176 ISQSAVVTASQLDGVPIVALKASGLIRPMVDKWFHEAGVTPNYTIEVGGAGTAIELVRGG 235
           +SQ   +  + L G  ++ L ++  +   +D +       P  TI V     A  +V  G
Sbjct: 179 LSQP--LPLADLAGTALIGLSSADPLAAKLDSYLENVDPPPKVTISVQTYSLARAMVESG 236

Query: 236 LGVTFVNSFSLM 247
            G+T ++ F+ +
Sbjct: 237 AGLTVIDPFTAL 248