Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 6/279 (2%)

Query: 3   IKLRQIEAFRTVMREGSMVRASAAMAVTQPAISYMISGLEAAVGFPLFNRQGGKLSATPE 62
           I LR +EAFR +M   S+  A+  + VTQP ++ +I+ LE  +   LF R  G+L  TPE
Sbjct: 5   ITLRHLEAFRAIMVRKSVTGAAEMLEVTQPVVTRLIADLEERIALTLFTRTKGRLVPTPE 64

Query: 63  AIQLLAEVDRLYQGLESVEAVAHKIANYGNAELRILITQALSAGRIVNGIGKFAALHPGI 122
           A  L+ +V++    +E +   A  I +     L I  +  ++   +   I  F   HP  
Sbjct: 65  AALLVKDVEQSLLSIERIANAATNIKSLKMGRLEIAASPNMALSFLPRAINSFTLAHPEA 124

Query: 123 KIDLDVEHRELITHRVNSGQADLG--ILSISPGLEDQSSTLFSSPIICVASPDAQISQSA 180
            + + +     +   V   Q DLG  +          S TL S+ ++ V      ++   
Sbjct: 125 HVSMRMHSSPTVLDMVQRDQCDLGFAMFPARSTKSGNSETLVSAKMVAVVPKTHALATKR 184

Query: 181 VVTASQLDGVPIVALKASGLIRPMVDKWFHEAGVTPNYTIEVGGAGTAIELVRGGLGVTF 240
            +     +G   +++      R  +D      GV  +   E   +   ++LV  G+G++ 
Sbjct: 185 TLRPEHFEGERFISMMPLMESRMRIDSLMLSHGVRRHVNCETQTSAAVLQLVEAGVGISI 244

Query: 241 VNSFSLMERADSQLQSFGLD----NSLELKIGVINSSSL 275
           ++  +      + ++    +    N   + I   NSS+L
Sbjct: 245 IDPLTACGYTGTGVKFLNFEPVIRNDYSIVISQRNSSTL 283