Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 301 a.a., transcriptional activator protein LysR from Pseudomonas putida KT2440

 Score =  156 bits (395), Expect = 5e-43
 Identities = 97/299 (32%), Positives = 153/299 (51%), Gaps = 1/299 (0%)

Query: 4   RITLRHLEAFRAIMVRKSVTGAAEMLEVTQPVVTRLIADLEERIALTLFTRTKGRLVPTP 63
           ++++RH+E FRAIM   SVTGAA +L  +QP V+R +A LE+   L LF R  GRLV T 
Sbjct: 2   KLSVRHIEVFRAIMAAGSVTGAARLLFTSQPTVSRELARLEQVTGLNLFEREGGRLVATA 61

Query: 64  EAALLVKDVEQSLLSIERIANAATNIKSLKMGRLEIAASPNMALSFLPRAINSFTLAHPE 123
           +A LL+++VE++ + +ERI   A  I++ + GRL I   P  + + LP+A   F   H  
Sbjct: 62  QALLLIEEVERAYVGLERIDRFAQAIRNFEQGRLAITCLPLFSQTLLPKACQRFHQQHSG 121

Query: 124 AHVSMRMHSSPTVLDMVQRDQCDLGFAMFPARSTKSGNSETLVSAKMVAVVPKTHALATK 183
             VS+    SP + + +   Q DLG      +  +    E L SA MV V+P+ H L  K
Sbjct: 122 VSVSILAQESPLLEESLVAQQHDLGLTEV-EQIPRGAYGELLFSANMVCVLPEHHPLQVK 180

Query: 184 RTLRPEHFEGERFISMMPLMESRMRIDSLMLSHGVRRHVNCETQTSAAVLQLVEAGVGIS 243
             L    F    FI++  L   R R+D    + GV R    ET ++A+V  +V  G+G++
Sbjct: 181 AELELSDFHEVDFINLASLDTYRQRLDQHFRAAGVNRRTVIETTSAASVCAMVRQGLGVA 240

Query: 244 IIDPLTACGYTGTGVKFLNFEPVIRNDYSIVISQRNSSTLILKPFIDHAKREILNMVPA 302
           II+PL+       G+        +     ++      ++  ++PF +  + +   M  A
Sbjct: 241 IINPLSGLEAAQGGLPIRRLRVSVPYQVMLIRPDHRPASAAVEPFCEALRVQAKEMQQA 299