Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 317 a.a., Uncharacterized HTH-type transcriptional regulator YbhD from Escherichia coli ECRC101

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 20/278 (7%)

Query: 7   LRHLEAFRAIMVRKSVTGAAEMLEVTQPVVTRLIADLEERIALTLFTRTKGRLVPT---- 62
           L  ++AF  +    S   AA++L +TQP +TR I  +EE + + LF RT  ++  T    
Sbjct: 5   LSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGK 64

Query: 63  ---PEAALLVKDVEQSLLSIERIANAATNIKSLKMGRLEIAASPNMALSFLPRAINSFTL 119
              PEA  L+K  +++L +I        ++ +   G + +A  P     FLP AI  F  
Sbjct: 65  RLLPEARELIKKFDETLFNIR-------DMNAYHRGMVTLACIPTAVFYFLPLAIGKFNE 117

Query: 120 AHPEAHVSMRMHSSPTVLDMVQRDQCDLGFAMFPARSTKSGNSETLVSAKMVAVVPKTHA 179
            +P   V +    +   ++ V  ++ D G  M    +  S +   LV+   V    + H 
Sbjct: 118 LYPNIKVRILEQGTNNCMESVLCNESDFGINMNNV-TNSSIDFTPLVNEPFVLACRRDHP 176

Query: 180 LATKRTLRPEHFEGERFISMMPLMESRMRIDSLMLSHGVRRHVNCETQTSAAVLQLVEAG 239
           LA K+ +  +   G + I +     +R+ I+  +     +     E +  +  L LVEAG
Sbjct: 177 LAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAG 236

Query: 240 VGISIIDPLTA--CGYTG-TGVKFLNFEPVIRNDYSIV 274
           +GIS +  L      Y+   G+  +  EPVIR    I+
Sbjct: 237 LGISALPGLAMPHAPYSSIIGIPLV--EPVIRRTLGII 272