Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 547 a.a., Oligopeptide-binding protein AppA from Xanthobacter sp. DMC5

 Score =  132 bits (332), Expect = 3e-35
 Identities = 126/436 (28%), Positives = 190/436 (43%), Gaps = 57/436 (13%)

Query: 86  LAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSLQRAADPKRSSFSANFTALEK 145
           LA  W  S D   +TF LR+GV +H G  +  A DV YS+Q   +       A F ++  
Sbjct: 100 LATEWSVSPDGLTYTFKLREGVKWHDGR-DFTADDVAYSIQLLKEGHPRG-RATFASVTA 157

Query: 146 VEALDDYTVKVTLKYPDTAFLGRVSNYHGGQIVSK---AAAEKLGERYGQAPIGTGPFAF 202
           VE  D +T  + L  P   +L    + +   IV+K   A  + L  + G APIGTGPF F
Sbjct: 158 VETPDPHTAIIRLSKP-APYLLTALDANESPIVAKHIYAGTDPLTNKNGAAPIGTGPFLF 216

Query: 203 SEHITQQYVKLVANDQYF-RGKPKLGAIVYRMIPSDSARELAFASDELDLMLG----KRE 257
            E +   ++ L  N  Y+   KP L  +V R I   SAR  AF + ELDL  G    + +
Sbjct: 217 KEWVRGSHIILERNPDYWDADKPYLDRVVVRFIADQSARAAAFETGELDLAGGPPVPRSD 276

Query: 258 QRWVERSRARGVNVDVFE-PAEFRTLFLNRNIKPLDDVKVRQAIAASVNINEIIRYAGKD 316
              V+     G     +E       L+ N +   L D +VR AIA ++++N+++     D
Sbjct: 277 LARVQALPNLGSETRGYEYNGNMTQLYFNFDTPQLKDKRVRLAIAQALDLNKLL-----D 331

Query: 317 VADGGCSII------PNGYQGLDCSAGPYAYDPAHAKALLASAGYP---NGLKLK-SVVS 366
           V   G   I      P+  + +D S  PY +D   A  LL  AGYP   +G +    + +
Sbjct: 332 VVYFGYGTIAPSPVGPDLKKFVDPSIKPYPFDLKAANRLLDEAGYPRKADGTRFALRLYA 391

Query: 367 NAAPQLPIMEIIQAQLAKAGITLEMEVVDHATYQAKSRQDQSAIVFYGAARYPGADYWLT 426
           N        + ++  LAK GI ++ +  D +TY  K+              Y G ++ LT
Sbjct: 392 NPFNGRESGDFVKQALAKVGIPVDFQFFDFSTYIQKA--------------YTGREFDLT 437

Query: 427 ----------------EFYDSASAIGAPAAMSNFGHCSVADDAIRKARVEADPQTQLDLW 470
                            F+     IG P + ++       D  +    VE+DP+ +  +W
Sbjct: 438 LESLSNTFDPTPGIQRIFWSKNFKIGLPFSNASHYDNPQVDALLEAGAVESDPEKRRQIW 497

Query: 471 KKAQVQIHDDVCAIPL 486
              Q  IHDDV A+ L
Sbjct: 498 FAFQKAIHDDVAAVHL 513