Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  127 bits (318), Expect = 1e-33
 Identities = 135/518 (26%), Positives = 221/518 (42%), Gaps = 59/518 (11%)

Query: 14  AALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKGIVAE-MFNALVRF 72
           A +  L G   L+ A  +  A+  V          DP + +   D    AE +FN L +F
Sbjct: 5   AVIPFLLGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQF 64

Query: 73  PPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFH-----GGYGELKAADVVYSLQR 127
             G +   A+   LA +WE SDD K +TF LR+GV FH            A DV+++  R
Sbjct: 65  ERGGT---AVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNR 121

Query: 128 AAD---PKRSSFSANF---------TALEKVEALDDYTVKVTLKYPDTAFLGRV------ 169
             D   P R ++   F           + KVE LD++TVK TL   D AF+  +      
Sbjct: 122 MLDKDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFAS 181

Query: 170 --SNYHGGQIVSKAAAEKLGERYGQAPIGTGPFAFSEHITQQYVKLVANDQYFRGKP-KL 226
             S  +  Q++    A  +     Q PIGTGPF FS++     ++   N  Y++ +  K+
Sbjct: 182 IQSAEYADQLLKNGKAADI----NQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKI 237

Query: 227 GAIVYRMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAEFRTLFLNR 286
             +++ +    S R      +E  + L  R    +E  +A   N+ + + A F   ++  
Sbjct: 238 DNLIFAITTDASVRMQKLKKNECQVTLFPRPAD-IEPLKA-DKNLQMPQQAGFNLGYIAY 295

Query: 287 NI----------KPLDDVKVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSA 336
           N+           P+  +KVRQA+  +V+  +II    +       + +P      D S 
Sbjct: 296 NVMDKIKGSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSI 355

Query: 337 GPYAYDPAHAKALLASAGYPNGLKL----KSVVSNAAPQLPIM-EIIQAQLAKAGITLEM 391
              A+DP  AK LL  AG   G ++      V     P   +M E++Q+  AK GI  ++
Sbjct: 356 KDAAFDPEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKI 415

Query: 392 EVVDHATYQAKSRQDQSAIVFYGAARYPG-ADYWLTEFYDSASAIGAPAAMSNFGHCSVA 450
              +   Y  +S+  +   +  G +   G  D WL   Y   +  G     +NF      
Sbjct: 416 VSYEWGEYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAVDG-----NNFSKWCYK 470

Query: 451 --DDAIRKARVEADPQTQLDLWKKAQVQIHDDVCAIPL 486
             DD I++A+  +D   + +L++KAQ  + + V   P+
Sbjct: 471 PYDDLIKQAKATSDQAKRTELYQKAQHILKEQVPITPI 508