Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  125 bits (313), Expect = 5e-33
 Identities = 132/480 (27%), Positives = 210/480 (43%), Gaps = 46/480 (9%)

Query: 65  MFNALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGG-----YGELKAA 119
           +FN LV F PG+++   ++  LAERW+ S D   +TF LR+GV FH         +L A 
Sbjct: 68  VFNRLVDFKPGTTE---IQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNAD 124

Query: 120 DVVYSLQRAADP------KRSSFSANFTA------LEKVEALDDYTVKVTLKYPDTAFL- 166
           DV++SL R  DP      K S     F +      L+ V   D++TV +TL  P+  FL 
Sbjct: 125 DVLWSLNRQLDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLR 184

Query: 167 ----GRVSNY---HGGQIVSKAAAEKLGERYGQAPIGTGPFAFSEHITQQYVKLVANDQY 219
               G  S Y   +G Q++      +L  +    PIGTGPF F  +     V+   N  Y
Sbjct: 185 DMAMGFTSIYSAEYGDQLLKSGKTAELNSK----PIGTGPFIFQRYNKDAQVRFKPNPDY 240

Query: 220 FRGKPKLGAIVYRMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAEF 279
           FRGKP   A+V+ +    + R     ++E  + L  +        +   + V+  E    
Sbjct: 241 FRGKPPADALVFAIAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVT 300

Query: 280 RTLFLNRNIKPLDDVKVRQAI-AASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGP 338
             + +N   K L+DV+VR+AI  A      + +  GK  A  G +  P    G +     
Sbjct: 301 GYIAMNTQHKYLNDVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQN 360

Query: 339 YAYDPAHAKALLASAGYPNGLKLKSVVSNAA------PQLPIMEIIQAQLAKAGITLEME 392
              D   A+ALL+ AG P G  +     N        P+L   E++QA L + G+ L++ 
Sbjct: 361 PPRDLDKARALLSQAGVPEGTVITLFTRNGGGPTNPNPRLS-AEMLQADLKQIGLKLDIR 419

Query: 393 VVDHATYQAKSRQDQSAIVFYGAARYPGADYWLTEFYDSASAIGAPAAMSNFGH-CSVA- 450
           V++ A    +++  ++ +V  G A   G       F     +  A  +  N+   C+   
Sbjct: 420 VMEWAEMLRRAKNGEADLVSTGWAGDNGDP---DNFLSPLLSCDAVKSGENYARWCNPKF 476

Query: 451 DDAIRKARVEADPQTQLDLWKKAQVQIHDDVCAIPLFGLKQVWAKAASVDYGYVLHGALN 510
            + I +AR   D   +  L+ +A     D+   I +   K   A   +V+ GYV++   N
Sbjct: 477 QELISRAREVIDNDERARLYNEALKVYDDEQPWISMAHPKMFTAMRDNVE-GYVINPLTN 535