Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 519 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  132 bits (332), Expect = 3e-35
 Identities = 124/399 (31%), Positives = 188/399 (47%), Gaps = 24/399 (6%)

Query: 11  SALAALVTLS-GISPLALAQDSARATISVSPGIA--DITSLDPHRASLVGDKGIVAEMFN 67
           SA AA + LS  +   A AQ +A A  ++  GI   D   ++P  AS      I+  +++
Sbjct: 7   SAWAAAMMLSLSVGGQAAAQTTANAGGNLIIGITSGDPLVMNPLYASDRTTLTIMQALYS 66

Query: 68  ALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSLQR 127
            L  +  G      +E  LA+    S D + +T  L+ G+ +  G   + A DVV++  +
Sbjct: 67  PLYSYNEGK-----VEWGLAQSLTPSADNRSYTLKLKPGLTWQDGQ-PITADDVVFTFNK 120

Query: 128 AADPKRSSFSANFTALEK----VEALDDYTVKVTLKYPDTAFLGR-VSNYHGGQIVSKAA 182
             D K+ SF  +          V  +D+ TVK TL     AF+G  V  Y   Q V    
Sbjct: 121 LLDEKQHSFFRSMFVYNNQPVAVSKVDELTVKFTLPQVSAAFVGSLVQIYPIPQHVFAGE 180

Query: 183 AEKLGERYGQAPIGTGPFAFSEHITQQYVKLVANDQYFRGKPKLGAIVYRMIPSDSAREL 242
           A+        APIG+GPF F E+ + QY  L   D Y+ GKPKL A+ YR     +A  L
Sbjct: 181 ADVSKNAKNDAPIGSGPFKFGEYRSGQYYALSRFDDYWNGKPKLEAVTYRFARDANAARL 240

Query: 243 AFASDELDLMLGKREQRWVERSRARG-VNVDVFEPAEFRTLFLNRNIKPLDDVKVRQAIA 301
           A  + E++L L   + + V   +A G  +  ++       +  N+N+  + +  +RQAIA
Sbjct: 241 AMQNGEINLKL--IDPQDVRPLKATGRFDFIIYPEGRLAYMVFNQNVDSMKNKALRQAIA 298

Query: 302 ASVNINEIIR--YAGKDVADGGCSIIPNG--YQGLDCSAGPYAYDPAHAKALLASAGYPN 357
            ++N +E+++  +   D A    SI+     YQ  D  A PY  D   AKAL   +G P 
Sbjct: 299 YAINKDELVQTAFTSLDYAKPANSILTPDTLYQSEDVEAYPYHLD--KAKALFRDSGQPQ 356

Query: 358 GLKLKSVVSNAAPQLPIMEI-IQAQLAKAGITLEMEVVD 395
           GLKL+    NA      M + IQ QL   GI +E+  +D
Sbjct: 357 GLKLRLAYINANKTQESMGLYIQQQLKGIGINVELLPLD 395