Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 530 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  144 bits (364), Expect = 6e-39
 Identities = 120/447 (26%), Positives = 191/447 (42%), Gaps = 32/447 (7%)

Query: 65  MFNALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYG-----ELKAA 119
           ++N LV F  G+++   L   LAERW+ S D   +TF LRKGV FH         +  A 
Sbjct: 55  IYNRLVDFKVGTTE---LVPSLAERWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNAD 111

Query: 120 DVVYSLQRAADPKRSSFS------ANFTALE------KVEALDDYTVKVTLKYPDTAFLG 167
           DV++S QR  D             ANF +L        ++ +DDY V+ TL + +  FL 
Sbjct: 112 DVIFSFQRQRDLNHPYHKVSGGTYANFESLSFRSLITAIDRVDDYRVRFTLSHAEAPFLA 171

Query: 168 RVSNYHGGQIVSKAAAEKLG----ERYGQAPIGTGPFAFSEHITQQYVKLVANDQYFRGK 223
            ++ Y    + ++ A + L     E+    PIGTGPF  +++     +   A   Y++GK
Sbjct: 172 DLAWYFASVLSAEYADQMLKAGAPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPDYWQGK 231

Query: 224 PKLGAIVYRMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAEFRTLF 283
            KL  +V+ + P  S R      +E  +M         +    + + +          L 
Sbjct: 232 AKLDRLVFSITPDASVRYAKLRKNECQVMPFPNPAELADIKSNKDITLMQKAGLNIGFLA 291

Query: 284 LNRNIKPLDDVKVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGPYAYDP 343
            N    PLD++KVRQA+  ++N   II    +       +++P G          Y YDP
Sbjct: 292 FNTRKAPLDNLKVRQALTMAINKPAIIEAVFQGTGSAAKNLLPPGVWSAAADLKDYEYDP 351

Query: 344 AHAKALLASAGYPNGLKLKS-VVSNAAPQLP----IMEIIQAQLAKAGITLEMEVVDHAT 398
             A+ALL  AG   G  +    +    P  P    + E+IQA  AK G+   +   +   
Sbjct: 352 GKARALLKDAGLAEGTTIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVNANIVSYEWGE 411

Query: 399 YQAKSRQDQSAIVFYGAARYPG-ADYWLTEFYDSASAIGAPAAMSNFGHCSVADDAIRKA 457
           Y  + R  +      G     G  D +    +   SA G   + S+       D  I  A
Sbjct: 412 YLKRVRSGEHQAALMGWTTATGDPDNFFGPLFTCTSANG--GSNSSKWCYPPFDKLITDA 469

Query: 458 RVEADPQTQLDLWKKAQVQIHDDVCAI 484
           R E D Q +++L+++AQ  +H+   A+
Sbjct: 470 RAEQDHQKRVELYRQAQFMMHEQAPAV 496