Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 512 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  132 bits (332), Expect = 3e-35
 Identities = 136/521 (26%), Positives = 221/521 (42%), Gaps = 44/521 (8%)

Query: 13  LAALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKGIVAEMFNALVRF 72
           +  ++ ++G+  L     +A  TI ++   +  TS+DP       +  +   +F+ LV  
Sbjct: 1   MKGMLFVAGLMTLMPIAQAADLTIGLA---SSTTSMDPQFYVGGANSAMARNLFDGLVN- 56

Query: 73  PPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSLQR---AA 129
               ++   +   LA  W++ DD   W F LR  V FH G  ++ A DVV S++R   AA
Sbjct: 57  ---QNEKQHITPALAVSWKAIDDT-TWQFRLRPNVKFHDG-ADVNARDVVASVKRVALAA 111

Query: 130 DPKRSSFSANFTALEKVEALDDYTVKVTLKYPDTAFLGRVSNYH--GGQIVSKAAAEKLG 187
               S+++     + ++  +D  TV++  K P    L  +S       ++V +      G
Sbjct: 112 KNSPSAYTPYVADISEIREIDPLTVEIKTKVPAALLLNNLSRIAILPARLVDQPTDVLNG 171

Query: 188 ERYGQAPIGTGPFAFSEHITQQYVKLVANDQYFRGKPKLGAIVYRMIPSDSARELAFASD 247
              G+  IGTGPF F  +     V L  ND Y+ GK +   +  R+I + SAR  A  S 
Sbjct: 172 ---GKDVIGTGPFKFVSYTPDDKVVLSRNDHYWGGKAEWDTVTLRVIKNSSARIAALLSG 228

Query: 248 ELDLMLG---------KREQRWVERSRARGVNVDVFEPAEFRTLFL----NRNIKPLDDV 294
           ++D++            R+Q +   S   G  +    P + R +      +    PL   
Sbjct: 229 DVDMIESVPTADRAAIARQQAFATES-VPGNRILYLHPDQDRDVSPFAKGDDGKNPLRKA 287

Query: 295 KVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGPYAYDPAHAKALLASAG 354
           +VRQA++ ++N + +++            ++P GY G   +     YD A AK  L +AG
Sbjct: 288 EVRQAMSLAINRDALVQRILDGQGLPSSQLVPQGYPGYSANIPAPVYDLAQAKQKLTAAG 347

Query: 355 YPNGLKLKSVVSN--AAPQLPIMEIIQAQLAKAGITLEMEVVDHATYQAKSRQDQSAIVF 412
           YPNG  L    SN        I + +    ++AGI  E+  +    Y AK+ Q + ++V 
Sbjct: 348 YPNGFTLTFHASNDRYPNDAKIAQALGQMFSQAGIKTEVVTMPGNVYFAKAAQREFSLVM 407

Query: 413 YGAARYPG-ADYWLTEFYDSASAIGAPAAMSNFGHCSVA--DDAIRKARVEADPQTQLDL 469
            GAA   G A   L    ++    G  A   N G  S A  D  + +AR   D   +  L
Sbjct: 408 GGAAIETGEASGVLGPLLET---FGPNAGQGNRGRYSNAEFDKLLNQARATLDEPQRDAL 464

Query: 470 WKKAQVQIHDDVCAIPLFGLKQVWAKAASVDY-----GYVL 505
            ++A      +   IPL  L   WA      Y     GY L
Sbjct: 465 LQQATELAVKEQGVIPLLFLSNTWAMKKGYSYVGRTDGYTL 505